Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04566 ATGACCAAAACTGTAGTGGACGACTGTCGTGGCGTCCTTCATGTCTATAGCGATGGTTCCATAGTTCGCGCTTCGCGTCCAGGCTTCAACGTCCCCGTCCACGACGACGGCACCGTTTTATGGAAAGACGTCGTTTTTGACCCTGCACATGATCTTCAGCTTCGGCTCTACAAGCCAGTAGATTCAACCGGCTCCAAGCTTCCCATTTTCTATTACATCCACGGCGGAGGCTTCTGCATCGGTTCACGCACCTGGCCAAACTGTCAAAACTATTGCTTCCGCCTCGCTTCTGAGCTTCGAGCCGTAGTTGTCGCTCCCGATTATCGGCTTGCGCCGGAGAACCGCCTCCCAAGTGCAATTGACGACGGCTTTGCTGCTGTTAAGTGGCTTCAAGCCCAAGCCGTGAGCACCGAACCGGACCCCTGGTTGAGCCACGTGGCTGATTTTAGCCAGGTTTTTATTTCAGGTGACTCGGCTGGTGGAAACATAGCTCACAATTTGGCGGTTCGGCTTGGGTTTGGGTCGCTTGATTTGGCGCCGGTTCAGGTCAGGGGTTACGTTCTGTTGGCACCGTTTTTTGGTGGAACCGTTCGAACCAAGTCAGAAGCGGAAGGACCAAACGACGCTTTTCTCAATTTAGAACTTATTGACAGGTATTGGAGGCTTTCGATACCAGTTGGGGAAAATACTGATCACCCCCTTGTGAATCCATTTGGGCCGATTAGTAAGAGCCTTGAAGCAATTGATCTTGACCCAATTCTAGTGGTGGTTGGAGAAAATGATTTGCTTAAAGACAGGGCAGAGGATTATACAAGGAGGCTTAAGAATTGGGGGAAAAATGTAGAGTATGTGGAATTTGAAGGGCAACAACATGGATTCTTCACTATTGATCCTAATTCAGAACCATCAAACAAGTTGATGTTGGTCATCAAACAATTCATAGACAAGCATTCGGGCAATATTTGA 966 0.4896 MTKTVVDDCRGVLHVYSDGSIVRASRPGFNVPVHDDGTVLWKDVVFDPAHDLQLRLYKPVDSTGSKLPIFYYIHGGGFCIGSRTWPNCQNYCFRLASELRAVVVAPDYRLAPENRLPSAIDDGFAAVKWLQAQAVSTEPDPWLSHVADFSQVFISGDSAGGNIAHNLAVRLGFGSLDLAPVQVRGYVLLAPFFGGTVRTKSEAEGPNDAFLNLELIDRYWRLSIPVGENTDHPLVNPFGPISKSLEAIDLDPILVVVGENDLLKDRAEDYTRRLKNWGKNVEYVEFEGQQHGFFTIDPNSEPSNKLMLVIKQFIDKHSGNI. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04566 321 Coils Coil 260 280 - -
Seca4g04566 321 Pfam alpha/beta hydrolase fold 71 294 IPR013094 GO:0016787
Seca4g04566 321 PANTHER ARYLACETAMIDE DEACETYLASE 9 298 - -
Seca4g04566 321 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Seca4g04566 321 Gene3D alpha/beta hydrolase 16 315 IPR029058 -
Seca4g04566 321 SUPERFAMILY alpha/beta-Hydrolases 10 317 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04566 Seca-Chr4 84330549 84332882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04566 5 314 Carbohydrate Esterase AT5G16080 35.202 3.53e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04566 - - aprc:113858789 567.385