Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04552 ATGACCCCTGACTATGATACTAGATCTTCATTTGTTGTTTCATTTGACATTGGAAATGTAGTGTTTACAAAGTTTAAAGGTTCTCCTGAAGACAGTCTTTCTCATGAAGCTGACATTTTGAAACCCAATTTGGTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGCTCTCTTTCCACTGATTCAACTAAATTTCTAGGTGAGAATTTTGCAATGATATCTGGCACAAGCATGGCTGCACCTCACGTTGCTGGTCTTGCTGCACTAGTTAAGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGTGCTTTCCACCACAGCTTCTCTGTATGACAACAATAGGAAGCCAATCATGTCTCAATGGTCCTATGCCTCACTGATAAGTGCCAATTATATGATATATTCTTGTATTTTTACTGCATTTATCAAGGGTAAAATAGTAATTTATGTCCCAAAATAA 468 0.3825 MTPDYDTRSSFVVSFDIGNVVFTKFKGSPEDSLSHEADILKPNLVAPGNFIWAAWSSLSTDSTKFLGENFAMISGTSMAAPHVAGLAALVKQKFPNFSPAAIGSVLSTTASLYDNNRKPIMSQWSYASLISANYMIYSCIFTAFIKGKIVIYVPK. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04552 155 SUPERFAMILY Subtilisin-like 37 127 IPR036852 GO:0004252|GO:0006508
Seca4g04552 155 ProSiteProfiles Serine proteases, subtilase domain profile. 1 136 - -
Seca4g04552 155 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 122 IPR045051 -
Seca4g04552 155 Pfam Subtilase family 39 111 IPR000209 GO:0006508|GO:0008236
Seca4g04552 155 ProSitePatterns Serine proteases, subtilase family, serine active site. 75 85 IPR023828 -
Seca4g04552 155 Gene3D Peptidase S8/S53 domain 35 119 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04552 Seca-Chr4 83999705 84000172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04552 29 128 Subtilisin-like Serine Gene Family AT4G20430 70.000 9.13e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04552 - - gmx:100814065 184.111