Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04535 ATGATAGAAGAAGAGACTGTGCTGACTCAGATGCAGGGCATAGTCACTATTTTGGGCTGTGACACTGATATAAACACAGCTTCTGCCCCTTCTCTTCGTCGAACTCTATCCGCAGACATGTCTTCCAAGAAATGGCTTTCTCAAAATGGGTCCTCCTCCCCCATGAAAAAGGTTGCTTCATCTGAGCAACTCTTGCACCCTAAAACCATTGCTGACTCATCCTCCTCCTCCTCTGAAGGAGAAGAAGCTGAAGCAGAACGAGAAAGGCTTGAGATTTGGAGCTCAATCCAACGAAACAAAAAAGAGGAGCAAGAAAAAGCAGGACCATTTGATACTTGGAGCTCAATCATATCCCTCAAGCCCAAGGATGAAATCTCCAAGTCACTTCCAGTGACTCCTTATATTCACCCTCTTGTGAAAAGGTCAAAAAGCTCTTTGAGTGAGAAGAGCCTTGAAATCTGCACTGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGTTGTTCTCCTCTTACCCTTCATCTGAGACAGGGGATACAGAGGAAGAAGAGCAAAAGCAACAAGAAGAAGAAGAAAAAATGATTGAGCCAGAAGAAGAGCCAAGGTACAATTATGTTGCTTCAGCTAACAAGAAGTCCCCACCACGCTCTTTCCCTCCACCACTCCCTTCACTCTCTCGCCAAACAGGGCCTTCCCTTCATATGAGGCCCCGCCGTGACAACGGAAGGTTGGTCCTCGAAGCTGTGTCTCTTCCTTCAATGAACAATTTCTGTGTTCAGCGCCAAGATGGTCGTCTTGTACTCACTTTTGCCAATCACAACGACGAGACCAAGGAGGATGCTGAGAAGGAAGAAAAGAAAGAGAATGATCATGTGGAGGGAGAGCTTGGAGGGTTTGAGGAGGATGATATTGATCAAGAAGAAAAAGAGGATGAGGATGAGGATGAAGATGATGAGACAGAGGAAGAGGAGGTTGTGGAATCTGAGAGTGACGTTAGGGATGTAGAGACTGTGATAGAGAAAGCGCCGTTATTGTCTAGTGGGATAGCTAGTTTAGCATTGATGGTGAATAAGCCAATTGGGTTAGTGAATAGGAACACAAAGTGGTCAGAGAAGTTCAATGAAGTGGCAAATTTAGAGGAGGATGTTAAGGTGGTGGAGCCTAATCAAATGGCACAATCACTGCCACCTAGGCCAAGGGTGGCTCGGTTGATTTCATCAAAACAAGCCTCAGCAGCTGCTGCTTCTTTCAATTTCAATGCATATGAACACTACTGGAGGACCAAGCCTACAGCAAAAGCTGCTAACCCACTTGGCCATCATCAACAGAACAACAATAACTCACCCCTGAAGAACAATAGCAACAACAAGCTCATTGTCTCTGGGGACAAGAACCGGGCCTCAAATAAGCAGCAGCAATTGCTGGTTCTGAGAGGGAAGAATGGTGATTATTTGGTTCATCATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGCTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCCTGA 1530 0.4601 MIEEETVLTQMQGIVTILGCDTDINTASAPSLRRTLSADMSSKKWLSQNGSSSPMKKVASSEQLLHPKTIADSSSSSSEGEEAEAERERLEIWSSIQRNKKEEQEKAGPFDTWSSIISLKPKDEISKSLPVTPYIHPLVKRSKSSLSEKSLEICTESLGSETGSDGLFSSYPSSETGDTEEEEQKQQEEEEKMIEPEEEPRYNYVASANKKSPPRSFPPPLPSLSRQTGPSLHMRPRRDNGRLVLEAVSLPSMNNFCVQRQDGRLVLTFANHNDETKEDAEKEEKKENDHVEGELGGFEEDDIDQEEKEDEDEDEDDETEEEEVVESESDVRDVETVIEKAPLLSSGIASLALMVNKPIGLVNRNTKWSEKFNEVANLEEDVKVVEPNQMAQSLPPRPRVARLISSKQASAAAASFNFNAYEHYWRTKPTAKAANPLGHHQQNNNNSPLKNNSNNKLIVSGDKNRASNKQQQLLVLRGKNGDYLVHHLKSCKDSRRSLLFWEPYCIATS. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04535 509 MobiDBLite consensus disorder prediction 35 109 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 274 332 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 157 175 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 80 108 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 274 293 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 181 195 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 35 59 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 157 238 - -
Seca4g04535 509 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 28 508 IPR021410 -
Seca4g04535 509 MobiDBLite consensus disorder prediction 294 329 - -
Seca4g04535 509 Pfam Fantastic Four meristem regulator 216 269 IPR046431 -
Seca4g04535 509 MobiDBLite consensus disorder prediction 436 466 - -
Seca4g04535 509 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04535 Seca-Chr4 83475764 83477323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04535 - - aprc:113858041 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04535 4 83475764 83477323 Seca4g04535 4 83475764 83477323 ECH
Seca4g04535 4 83475764 83477323 Seca4g05340 4 100252766 100255056 PCT
Seca4g05337 4 100186393 100187613 Seca4g04535 4 83475764 83477323 PCT