Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g04497 | ATGTCTTCCAACAAGAAAAATCTTCTGAAAACAGTATTCACAGCTAATGGAAGCTGTGGCTGTGGCAAAAGCAAAGCAATTGAAGTACATGAACCCACCCCAATACTCAAAAACTCCAACTTTCACCAAAAGACAAATCCAAGTAGCAAGGCTTCCTCCACCACCACTTCAAGGGAACGAAACGGTGCTCTCTCCATGGATGATGATGATGATGATGATGATTTCACCTCCACCACCATCTCTGAACCTGAGACCATAACTACTCATCTTGACCATAACATCAAGAGCCCCATGAACTACTCTGTTCCAAAACAGAGTCCACTCGTAGACAGTGTGGCAATTGAGAAGGATTCAGAGGACCCATATCATGATTTCAGGCATTCTATGCTTCAAATGATATTTGAAAAGGAGATTGACTCAGAAGATGATCTTCAAGATCTTCTCCAATGCTTTCTTCACCTCAATGCTACATGTCACCACCATGTCATCCTTAAAGCCTTCAAGGAGATCTGTGAAGAGGCATTCCCTGATAAGGTTAGTACTAGTGCTACTCCTGTTGTGGCTGAACCTTCTCCTTCTCACAGGAACATCATTCGAAAGAGTCACTGA | 609 | 0.4286 | MSSNKKNLLKTVFTANGSCGCGKSKAIEVHEPTPILKNSNFHQKTNPSSKASSTTTSRERNGALSMDDDDDDDDFTSTTISEPETITTHLDHNIKSPMNYSVPKQSPLVDSVAIEKDSEDPYHDFRHSMLQMIFEKEIDSEDDLQDLLQCFLHLNATCHHHVILKAFKEICEEAFPDKVSTSATPVVAEPSPSHRNIIRKSH. | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g04497 | 202 | MobiDBLite | consensus disorder prediction | 35 | 90 | - | - | |
Seca4g04497 | 202 | Pfam | Transcriptional repressor, ovate | 118 | 173 | IPR006458 | - | |
Seca4g04497 | 202 | ProSiteProfiles | OVATE domain profile. | 114 | 173 | IPR006458 | - | |
Seca4g04497 | 202 | MobiDBLite | consensus disorder prediction | 181 | 202 | - | - | |
Seca4g04497 | 202 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 42 | 174 | IPR038933 | GO:0045892 | |
Seca4g04497 | 202 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | - | - | |
Seca4g04497 | 202 | MobiDBLite | consensus disorder prediction | 36 | 61 | - | - | |
Seca4g04497 | 202 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 112 | 171 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g04497 | Seca-Chr4 | 82485031 | 82485639 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Seca4g04497 | Ovate | 1.5e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g04497 | - | - | gmx:102660065 | 239.965 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca4g04497 | 4 | 82485031 | 82485639 | Seca4g04497 | 4 | 82485031 | 82485639 | ECH | |
Seca4g04497 | 4 | 82485031 | 82485639 | Seca4g04497 | 4 | 82485031 | 82485639 | PCT |