Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04474 ATGACAGACATCCATGAAGATTCTATCATGATTAGTTGTGATAATAGACTTGAAAGTGCTATTAACGTGGACCACCTCAATTCTAAATTATCATTAGAGGCCCCGTTAGAGCTGTATGAAGGAATGGAATTTTCATCAATTGAAGATGTAAAGAATTACTACACAAGGTATGCAAAGATTAAAGGTTTTAGTTTTCGCATGGGTCGTATTACTAAATCAATAACAAATGGTATGATGATTGGTCAAGAATTCCTTTGTTCAAAAGAGGGGTTTCAGAAAAAATTGCAGAAAGGGTAG 297 0.3434 MTDIHEDSIMISCDNRLESAINVDHLNSKLSLEAPLELYEGMEFSSIEDVKNYYTRYAKIKGFSFRMGRITKSITNGMMIGQEFLCSKEGFQKKLQKG. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04474 98 Pfam FAR1 DNA-binding domain 52 96 IPR004330 -
Seca4g04474 98 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04474 Seca-Chr4 82074179 82074475 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g04474 FAR1 5.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04474 - - psat:127129645 132.88