Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04426 ATGAGTGTGAGTGTGGCCGAGGAAGAATCAGGTCAAGAGGTTCATGTCCCTGCTGAAATTGATTGGCAGATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTGGGTGAGGGTTTTAGAGCATTGTACCTTGGGTTTGGGACTTCTTTGATGGGTACAATCCCTGCCAGAGCTCTATATATGGCTGCCCTTGAGATGACCAAGAGCAATGTAGGGACTGCTACGGTTAGGTTTGGTCTTGCTGAACCAACTGCTGCTGCAATTCCCAGTGCAGCCATGGCAGATTGGCAGCTCAACTTGTGTGGACTCCAGTTGATGTTGAAAATTATGAACACAGATGGTCTTAGGGGCTTGTGGGAAGCACATCATTTCAAGTTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCGATTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTTATTGTAATTCCAGTAATCCTAAGGCTTCTGATTTTAGATATATCAATGGGATTGATGCCTTCAGGAAAATTATGAACACAGAGAAGTGGGAAGAACATCACTAG 585 0.4598 MSVSVAEEESGQEVHVPAEIDWQMLDKSKFFFLGAALFSGVSATLGEGFRALYLGFGTSLMGTIPARALYMAALEMTKSNVGTATVRFGLAEPTAAAIPSAAMADWQLNLCGLQLMLKIMNTDGLRGLWEAHHFKLSAAMAAQLVWTPIDVVSQRLMVQGYCNSSNPKASDFRYINGIDAFRKIMNTEKWEEHH. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04426 194 Pfam Mitochondrial carrier protein 47 80 IPR018108 -
Seca4g04426 194 Pfam Mitochondrial carrier protein 137 188 IPR018108 -
Seca4g04426 194 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 47 101 - -
Seca4g04426 194 SUPERFAMILY Mitochondrial carrier 46 188 IPR023395 -
Seca4g04426 194 Gene3D Mitochondrial carrier domain 35 193 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04426 Seca-Chr4 81190537 81191281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04426 1 188 Chloroplast and Mitochondria Gene Families AT1G72820 50.000 3.60e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04426 K15121 - gmx:100784616 221.861