Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04388 ATGAGTTTTGAAGGCTCTTTGCAATCGATGTCTGCTACCTGCAGTTTCTTGTTCTTCTCCTTCACCCTTGTGTTCTCTTTGTTTTCTTTCCTCATCTTCATCTCGAGGATGAAGCCATGGTGTAACTGTGACACTTGCAAGAGCTACTTGAACATGAGTTGGGTTAACAAGTTTTGCAATCTCTGCGACTGGTACACTCATCTCCTACGCAACTCCCCGACCGGAACCATTCATGTCCACGTGTTGGGAAACACCATCACAACTAACCCAGACAACGTGGAATACATCCTCAAAACTAACTTCCACAACTACCCAAAAGGGAAACCTTTCTCCACTCTCCTCGGCGATCTTCTCGGCCGAGGAATCTTCAATGTCGACGGTGAATCTTGGAAGTTTCAGCGCAAGATGGCAAGCATGGAGCTCGGAAGCGTCGCGATTCGATCCTACGCGATGGAACTAGTCACCGAGGAGATCCAAACGAGGCTAATTCCTCTCTTAGCCTCAACCACACGAAGTGAAAACGGAGTTTTGGACCTGCAAGACATCCTAAGACGTTTCTCCTTCGACAACATTTGCAAATTCTCATTCGGTCTTGACCCAGGCTGTCTCCTTCCATCGCTCCCAGTTTCAAATCTCGCCGTCGCTTTTGACCTTGCATCGAAGCTCTCTGCAGAGCGAGCCTTGACCGCGTCAACGTTGATATGGAAGACAAAACGTTTCCTCAATATAGGATCAGAGAAGAAGCTGAAAGAAGCAATAAAGGTTGTAAACGATTTAGCTCAAGAGATGATACATCAGAGAAAAGAAATGGATATCGGCACAAGAAAAGACCTTCTCTCTCGTTTCATGGCTTCAGTAAACGACGACGTATACCTGAGGGACATCGTTGTCAGTTTCCTTTTGGCAGGCCGTGACACTGTAGCTGCCGGGTTGACCGGGTTCTTCGCTTTGCTGTCCAAAAGCCCAGAGGTGGAGGCGAAGATCCGGGAAGAGCTGGCCCAGGTGGTGGGCCCGGGCCAGGAGTTTGCGAGCTTTGAACAGACGCGGGAAATGCATTATCTCACAGCAGCGATTCACGAGAGCATGAGGCTCTTTCCACCGGTTCAGTTTGATTCCAAGTATGCTACGGAGGATGACGTGTTGCCAGATGGCACATTTGTGAAAAAAGGAAGTAGGGTCACATACCACCCGTATGCGATGGGTCGAATGGAGAAAATTTGGGGGCCTGATTGTCTTGAATTCAAGCCCGAGAGGTGGTTGAAAGATGGTGTGTTTGTACCAAAATGCCCTTTCAAGTACCCGGTTTTTCAGGCTGGTGTCAGGGTTTGTTTGGGAAAGGACTTGGCTTTGGTGGAGATGAAGTCTGTGGTTGCAGCGTTGCTACCGCGGTTCGATATTCGGGTGGTTGAACCGGATCAGGAGCTCCGGTTCGCACCCGGTCTAACTGCCACATTCAGAGGTGGCTTACCCGTTCATGTTTATGAAAGAAGATCCTAA 1497 0.4896 MSFEGSLQSMSATCSFLFFSFTLVFSLFSFLIFISRMKPWCNCDTCKSYLNMSWVNKFCNLCDWYTHLLRNSPTGTIHVHVLGNTITTNPDNVEYILKTNFHNYPKGKPFSTLLGDLLGRGIFNVDGESWKFQRKMASMELGSVAIRSYAMELVTEEIQTRLIPLLASTTRSENGVLDLQDILRRFSFDNICKFSFGLDPGCLLPSLPVSNLAVAFDLASKLSAERALTASTLIWKTKRFLNIGSEKKLKEAIKVVNDLAQEMIHQRKEMDIGTRKDLLSRFMASVNDDVYLRDIVVSFLLAGRDTVAAGLTGFFALLSKSPEVEAKIREELAQVVGPGQEFASFEQTREMHYLTAAIHESMRLFPPVQFDSKYATEDDVLPDGTFVKKGSRVTYHPYAMGRMEKIWGPDCLEFKPERWLKDGVFVPKCPFKYPVFQAGVRVCLGKDLALVEMKSVVAALLPRFDIRVVEPDQELRFAPGLTATFRGGLPVHVYERRS. 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04388 498 Pfam Cytochrome P450 85 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 SUPERFAMILY Cytochrome P450 59 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 CDD CYP86A 79 489 - -
Seca4g04388 498 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 Gene3D Cytochrome P450 51 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PANTHER CYTOCHROME P450 32 490 - -
Seca4g04388 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g04388 498 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04388 Seca-Chr4 80304885 80306381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04388 31 496 Cytochrome P450 AT2G27690 63.002 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04388 K20624 - gmx:100813091 822.772