Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04216 ATGCTTTTATGTGCAAGTGCAATATTGCAGATAAGGAGGTCATCGTATCATGATGTTGTGAGGGTAGCGGAGATTCAGAAGGTATTGGACATTAGTGGGGTTCAGACATATGTGATTAACAGCGCCAGAGTTCTTTTCCTGAATGCGAGGCCTCAGAATCAGATTAAGACTAATAGTAATGCTGTTAGTGCTGCTAAAACCAACTCCTATTTCTGTGAGATATGCAGAAGAAATCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTGGGAATAAAGAAGAATGGGAATGCGAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGGAAGGAATGGCAAGAAGGTTGCTATCAAAGGAAGAAGACGAAGAATTGCGTGAAGGAATCCACAAACAAGTATACAAAAGCACGCCTTCTCCTTGTCCTCCTCGGCCATCACCACAAGCTTGCTCAAATTCAAGGAGAAGAAAAGGAATACCTCATAGGGCACCTTTAGGACCCTAA 519 0.4277 MLLCASAILQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNARPQNQIKTNSNAVSAAKTNSYFCEICRRNLLDPFRFCSLGCKLVGIKKNGNASFVLSAKKDEEIGEGMARRLLSKEEDEELREGIHKQVYKSTPSPCPPRPSPQACSNSRRRKGIPHRAPLGP. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04216 172 Pfam PLATZ transcription factor 12 92 IPR006734 -
Seca4g04216 172 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 170 - -
Seca4g04216 172 MobiDBLite consensus disorder prediction 124 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04216 Seca-Chr4 75637717 75639801 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca4g04216 PLATZ 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04216 - - gmx:100787414 243.047