Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04185 ATGATTGAGATTGTTTACCCTGAACCTGCTGTTGATTATGATAATGGTTTCAGTGTTTTTCCATTTGATGATATTCCTCTCATGTCAGCCAATGTTCACTTTCACCATGTTTCAGTTGACAAGACTCTTCCTGCTATTGTGTGTCAAAGGATTACTGCAGGTGTTGAAAACATCATTCTGAGGGATGAATTTGATAACGATTTTGAATGTCGCATTTGTTGGGCTCGAAGAAGATGCAATGAAGGATATCTGACAAGGGGTTGGCACAATTTTTGTATGGCTATAGAGTTGAAGGGTGGTTGTATTTTGCATTTTAGTGTCAATGAGTCTGAGAATGTTTCTGTTGTTCATGTCAAGGTGATTTCAAATTTGTAG 375 0.376 MIEIVYPEPAVDYDNGFSVFPFDDIPLMSANVHFHHVSVDKTLPAIVCQRITAGVENIILRDEFDNDFECRICWARRRCNEGYLTRGWHNFCMAIELKGGCILHFSVNESENVSVVHVKVISNL. 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04185 124 SUPERFAMILY DNA-binding pseudobarrel domain 56 115 IPR015300 -
Seca4g04185 124 Gene3D - 21 123 IPR015300 -
Seca4g04185 124 Pfam B3 DNA binding domain 42 116 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04185 Seca-Chr4 75180832 75181693 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca4g04185 B3 4.6e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04185 - K10630 boe:106330003 38.1206