Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04174 ATGGCTACCACCACTAACAGATTAAGGAACAACGGGCGATTTGGTGTTTCAGAGTTTATAGCAAGTGTAATTCAAGGACGATGGTTTAGGGTTTCTATTTCTTTCTTGATCATGGTAGGAGCTGGCAATCCCTATCTTTTTGGAACTTACTCCCAGGCAATCAAATCTTCACAAGGTTATGATCAGAGCACACTCAACCTTTTGGGGTTTTACAAGGATCTTGGTGCGAGTTTGGGTCTTCCTTCTGGCTTGCTTGCAGAGGTAACCCCTCCATGGTTCGTGGTTCTTCTTGGCTCAGCCATGAACTTTGTTGGTTTTTTCATGATTTGGCTTGGTGCTACTCATAGAATATCCAAACCCAGAGTTTGGCAGATGTGCCTTTACATTTTCATTGGAGCAAGTTATCAGAATTATGCCAACACTGGAGTAGTAGTCACCACAGTCAAGAATTTCCCTGAAAGCCGAGGAACAACATTGGGTCTCTTGAAAGGTTACCTTGGGCTTGGTGGAGCTATATTGACCCAACTTTATTTGGCTATTTATGGGAATGATTCTGAATCTTTGATCCTTCTCATTGCATGGCTCCCTGCTGCTTCATCAATGGTATTTGCATACACAATTCGTGTCATCAAGGTTGGTAGGCAACCAAAGGAGCAGAAAGTGTTTTACCAATTTTTCTATGCATCACTTGCACTTGCTTTATTTCTCATGGCAATGATCATTGCTCAGAAACAAATTACTTTCTCCAAAGCAGCCTTTTGTGGAAGTGCAACTATGGTATGTTTTTTGCTCTTCCTCCCTGCATTAATTGCCATTAGAAAAGAATTCTTACTATGGAATAAGAAGAAAAATTTGGGGAATACTACAAATGAGATAATCATGAAAAAAGCACAAACAGTACTTGAATGGGAAGGAAAAATAGAGGATCCAGATACATCTTGTTTTGCTAGCATATTCAGTAAACTTGAAAGAGGAGAGGATCATTCCATCTTGCAAGCAATACTAAGCATTGACATGTTTCTATTGTTGATTGCATCGTTTGTTGGCTTTGGAGCAAACTTAACTGCAATGAACAATTTAGGACAAATTGGTGAGTCTCTAGGATACCCTGCCAGTGTAGTAAGTTCATTTGTATCACTTGTAAGCATTTGGAATTACTTTGGAAGGGTCTTTGCTGGTTTTGTTTCTGAAATTTTGCTTAAGAAATACAAATTTCCCCGCACCATGATGTTGACCTTGTCAATTTTCTTATCATGCATAGGCCATATCCTTATTGCCTTCCCAGTACCTGGTTCAGTGTATGTAGCATCAATCATAATTGGATTTTCCTATGGTGCACTACTCCCAATGTTCTCTGCAATTGTTTCTGAACTTTTCGGTCTTAAATACTTTGCCACATTGTTAAATTGTGTCGGTCTTCCTATTCCCCTTGGATCATATCTGCTGAATGTCAAGGTTACTGGGTTCTTTTATGATAAAGAGGCAAAAAAGCAACTCCTAGAAAGTGGCAAGGAGTTGGTGAAGGGCATGGAGTTGACTTGCATAGGAACTAAGTGCTACAAGCTTTCTTTCATAATAGTGGCATCCATCACTTTATTTGGAGCACTTACTTCATTGATTTTGGTGATAAGAACTCGGGAGTTCTACAAAAGTGACATATACAAGAAGTTCATAGGGAATGCACCAACGATAGAAATAGAGTTGACAACATCCTCGGTTCATGAAGAGCAAGTGACTAATGAGAGTGGATAA 1752 0.3955 MATTTNRLRNNGRFGVSEFIASVIQGRWFRVSISFLIMVGAGNPYLFGTYSQAIKSSQGYDQSTLNLLGFYKDLGASLGLPSGLLAEVTPPWFVVLLGSAMNFVGFFMIWLGATHRISKPRVWQMCLYIFIGASYQNYANTGVVVTTVKNFPESRGTTLGLLKGYLGLGGAILTQLYLAIYGNDSESLILLIAWLPAASSMVFAYTIRVIKVGRQPKEQKVFYQFFYASLALALFLMAMIIAQKQITFSKAAFCGSATMVCFLLFLPALIAIRKEFLLWNKKKNLGNTTNEIIMKKAQTVLEWEGKIEDPDTSCFASIFSKLERGEDHSILQAILSIDMFLLLIASFVGFGANLTAMNNLGQIGESLGYPASVVSSFVSLVSIWNYFGRVFAGFVSEILLKKYKFPRTMMLTLSIFLSCIGHILIAFPVPGSVYVASIIIGFSYGALLPMFSAIVSELFGLKYFATLLNCVGLPIPLGSYLLNVKVTGFFYDKEAKKQLLESGKELVKGMELTCIGTKCYKLSFIIVASITLFGALTSLILVIRTREFYKSDIYKKFIGNAPTIEIELTTSSVHEEQVTNESG. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04174 583 SUPERFAMILY MFS general substrate transporter 31 549 IPR036259 -
Seca4g04174 583 Pfam Nodulin-like 27 271 IPR010658 -
Seca4g04174 583 Gene3D MFS general substrate transporter like domains 334 551 IPR036259 -
Seca4g04174 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04174 Seca-Chr4 75035095 75036870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04174 18 572 Nodulin-like Gene Family AT2G28120 62.456 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04174 - - gmx:100799928 729.554