Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04159 ATGACAGAAACTAGTGGCATTGTTACTATGGAGAATCCAAGAGTAGGTATTCGTCATACTGGCTCAGCCGGAAAGCTAGTTTCAGGTGTGGAAGCTCAAATAGTGAGTGTGGATACACAGATGTCACTTCCTCCAAGACAATTGGGAGAATTATGGGTACGGGGTCCTAACATGATGCAAGGTTATCATAGCAATCCACAGGCTACAAGATTGACTATAGATAAAAAAGGGTGGTTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGTCTTCAGGTTTCCCCAGCAGAACTTGAAGGGCTTCTCGTTTCTCACCCTGAAATCCTAGATGCCGTCGTCGTCCCGTAA 399 0.4336 MTETSGIVTMENPRVGIRHTGSAGKLVSGVEAQIVSVDTQMSLPPRQLGELWVRGPNMMQGYHSNPQATRLTIDKKGWLHTGDLGYFDEDGQLYVVDRIKELIKYKGLQVSPAELEGLLVSHPEILDAVVVP. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04159 132 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 132 - -
Seca4g04159 132 Gene3D - 101 132 IPR045851 -
Seca4g04159 132 Pfam AMP-binding enzyme 1 105 IPR000873 -
Seca4g04159 132 SUPERFAMILY Acetyl-CoA synthetase-like 1 132 - -
Seca4g04159 132 Gene3D - 1 100 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04159 Seca-Chr4 74689163 74691025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04159 1 132 Monolignol Biosynthesis Gene Families AT4G05160 76.515 6.47e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04159 K01904 - gmx:100808944 246.514