Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04156 ATGGCCAAGCTTAGGGTAAGGAGCAAAAAGAAGCTTGTAGGTGTCATTTTGAAGCTTGAGATTGTATTAAAAAAGCTTCGAAAGAGCCTACTGGGTAGAAATAAATCAAGCTCCTATTGTGACCATTATAAAGAAGGAGGTGACACACGTTCTGTGCCAGAGGATGTGAAAGAAGGACATTTTGCTGTGATTGCAGTTGCAGAGGATGGGGAGGAACCGAAGAGATTCGTGGTGCCATTGAGCTGTTTAACGAACCCTGCATTCTTGAGGCTATTGGAGCAAGCAGCAGAAGAGTATGGGTTTGATCAAGATGGTGCATTAACCATTCCTTGCAGGCCTAGTGAGCTTGAGAGCCTATTGGCCCAGCAATGCCAATGGCAGGAAGAGGGATCTGAAACTGCTGGGCTAAGCTAG 414 0.4589 MAKLRVRSKKKLVGVILKLEIVLKKLRKSLLGRNKSSSYCDHYKEGGDTRSVPEDVKEGHFAVIAVAEDGEEPKRFVVPLSCLTNPAFLRLLEQAAEEYGFDQDGALTIPCRPSELESLLAQQCQWQEEGSETAGLS. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04156 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 119 IPR003676 GO:0009733
Seca4g04156 137 Pfam Auxin responsive protein 38 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04156 Seca-Chr4 74530056 74530469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04156 53 120 Calmodulin-binding Proteins AT5G20810 48.529 1.42e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04156 - K14488 qsu:112024380 153.68