Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04155 ATGGCCGAGATCAGAGTAAGAAGCAAAAAGGTTGTAGGTGGCATTTTGAAGCTCAAGATTGTCTTGGAAAAGCTTCAGAAGACTCTGTTACTGGGTAGAAATAAATTAAGTTTTTGTGGTGGCACAACCTCTGTGCCAGGGGATGTGAAGGAAGGACATTTTGCTGTGATTGCAGAGGATGGGGAGGAGCCGCCAAAGAGATTTGTGGTGCCATTGAGGAGTTTAAGCAACACAACATTCTTGACGCTATTGGAGCAAGCAGCCGAAGAGTATGGGTTTGATCAAGATGGTGCACTAACCATTCCTTGCAGACCTATTGAGCTTGAGATGCTATTGGCCCAGCTATGGCAGGAAGAGGGTGGCTCTCAAACTGTTGGGCTGAGCTGGAACTCTTGCCATAAAGCCAGCATGGTTAAAAGTTACTGA 426 0.4624 MAEIRVRSKKVVGGILKLKIVLEKLQKTLLLGRNKLSFCGGTTSVPGDVKEGHFAVIAEDGEEPPKRFVVPLRSLSNTTFLTLLEQAAEEYGFDQDGALTIPCRPIELEMLLAQLWQEEGGSQTVGLSWNSCHKASMVKSY. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04155 141 Pfam Auxin responsive protein 32 113 IPR003676 GO:0009733
Seca4g04155 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04155 Seca-Chr4 74517676 74518101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04155 46 103 Calmodulin-binding Proteins AT3G43120 53.448 1.68e-12 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04155 4 74517676 74518101 Seca4g04155 4 74517676 74518101 ECH
Seca4g04155 4 74517676 74518101 Seca4g09246 4 219472122 219472544 PCT