Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04149 ATGGCTGAGATTGAGGGATCTCCAGGAAGCTCCATGCATGGAGTAACAGGCAGAGAGCAAACCTTCATAGCCTCAGTTGCTTCCCCAATGGTCCCAACTGATACCACTGCCAAATTTGCTTTGCCTGTAGATTCTGAGCACAAAGCCAAGGTTTTTAAACTGTTCTCCATGGCCAATCCCCATATGAGAACCTTCCACTTATCTTGGATATCCTTCTTCACTTGCTTTGTCTCAACCTTCGCAGCAGCTCCTCTTGTCCCCATCATTCGTGACAACCTCAACCTCACTAAAAGTGACATTGGCAATGCTGGTGTTGCCTCTGTGTCTGGCAGTATTTTCTCCAGGCTTGCAATGGGTGCAGTTTGTGACCTCTTAGGCCCACGTTATGGCTGTGCCTTCCTTATCATGCTCTCTGCCCCAACTGTGTTCTGCATGTCATTTGTGAAAGATGCTGCAGGCTATATAGCAGTTCGGTTCATGATTGGGTTCTCGTTGGCCACATTTGTTTCATGCCAATACTGGATGAGCACAATGTTTAACAGTAAGATAATAGGGCTTGTGAATGGAACAGCAGCTGGGTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCATTGGTCTATGAATTGATCAGGCGAGTTGGGGCTACTCCCTTCACTGCATGGAGGATTGCCTTCTTCATCCCTGGTTGGTTGCATGTCATCATGGGTATCCTTGTCTTAACCCTTGGCCAAGATTTACCTGATGGCAACCTTGGTGCCTTACAGAAGAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGATATTTGCCCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGAGATTTAATCTCAAGCTGCACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAACCTTGTTGCTCGCCCCTTTGGTGGATATGCCTCTGATGTTGCAGCTCGGTTGTTTGGCATGA 1047 0.468 MAEIEGSPGSSMHGVTGREQTFIASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSMANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRVGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRDLISSCTLLESLLLHLEWQTLLLAPLVDMPLMLQLGCLA. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04149 348 CDD MFS_NRT2_like 65 309 IPR044772 GO:0015112
Seca4g04149 348 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Seca4g04149 348 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 309 IPR044772 GO:0015112
Seca4g04149 348 FunFam High affinity nitrate transporter 57 254 - -
Seca4g04149 348 SUPERFAMILY MFS general substrate transporter 59 308 IPR036259 -
Seca4g04149 348 Pfam Major Facilitator Superfamily 69 294 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04149 Seca-Chr4 74451006 74452406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04149 1 309 Inorganic Solute Cotransporters AT1G08090 83.819 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04149 K02575 - gmx:547946 609.372