Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04141 ATGGATTGGATTCCTAGAGTTGGTAAGGAATTTGATGATCATGAAGAAGCCTGGCAGTTTTGGGTAGAATACGGTTCAAGAATGGGTTTTGGAGTTAGAAAAGATTACTTCAACAAAAGGAAGGAAGATGGCTCCATTACATCTTGTAGATTCGTTTGTTGTAAGGAGGGGAAGAAGGACAAGAAGTCATCTTTGGTTAAAAAACCCAGGGCTGATACAAGAACTGAGTGCCAAGCAAGAATAGCACTTGTTGTGAAAAATGGAAAGTTTGTAATTCATGAGTTTGTAGAGAACCATAACCACCCTTTACAACTTGTAGAAACAACACATATGCTAGCATCTCACCGCAAAATTTCAGAAGTTCAAGCATATGAGATTGAAATGGCAGAGGACTCTGGATTGATGCAAAAGGCTTCATTTAAGCTTATGAGCACACATGCAGGAGGTAGAGCTAATCTTGGATATACATGGTTGGATGTGAAGAACTATCTCAAAGAAAGAAGACAACACATCATGGTGTATGGGGAAGCCGGTTGTCTCTTACAATATTTCCAACGGCAGCTTTTGGAGAATCCATCATTTTACCATGCATATTAA 597 0.392 MDWIPRVGKEFDDHEEAWQFWVEYGSRMGFGVRKDYFNKRKEDGSITSCRFVCCKEGKKDKKSSLVKKPRADTRTECQARIALVVKNGKFVIHEFVENHNHPLQLVETTHMLASHRKISEVQAYEIEMAEDSGLMQKASFKLMSTHAGGRANLGYTWLDVKNYLKERRQHIMVYGEAGCLLQYFQRQLLENPSFYHAY. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04141 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 152 - -
Seca4g04141 198 Pfam FAR1 DNA-binding domain 19 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04141 Seca-Chr4 74175221 74175817 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g04141 FAR1 2.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04141 - - aprc:113870350 276.944