Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04108 ATGAACAACAATTATAGTGATGGAGGCAATGATAGTTCTGATGAAAGTCATAGTGAAGATAACAATGATGTGGGTAATCAGAATGAGGCAGTGGACGAAGATTTAACATATGAACAGTATAAAAGTATAATAGACCTAACTGCGAATGACATTCGAGGTATGGAGTTTGGTAGTGAAGAGCATGCATGTAAATTTAATGATTCATATGCTAGGTGTCATGGCTTTGTTGCAAGAAAAGATGATATAAAACGTGATGCGGAAGACAATATTATAATGCGTCAATTGGTTTGCAACAAAGAGGGGTTGAGAAATAAAAAGCACTTTATAAGGTTGGATAGAAAGAGACCTCATAGGCCAATCACTCGTACTAGTTGTCAAGCTAAGCTTAGAGTACACTTTGATTACAAGAGATCAAAATGGACAGTCTTGTCCTTTGTGGAGACTCATAATCATTATTTATGTCCACCAAAATATAGACACTTAATCCCTGCACATCGCAAGATGGGTGATACAGATAAAGCTCAAGCGGAACGTTTGCATTCCTATGGAGTTAGGACTTGTCACATTATGGGATATATGTTGGCTCAGAAAGGTGGGTATAGTGTTTTAGGGTTTACCAAAAAGGATATGTACAATTATTTTAGTGAGAAAAACCGTGAGAAGATCAAAGATGGGGATGCATGCATTGCATTAAGTTATTTACAAGGCAAGGCAGATAATAATGGATTGATGCATTCATCATATTCATTTACAAGTGATGGTAAATTGAAGAATTTGTTCTGGGCAGATGAAGTTAGTAGAAGTGATTTTCAGTGCTTTGGTGATGTTCTAGCATTTGACACCACTTACAAAAAAAAACAAGTACAACAGACCTCTAGTGATTTTCTCCGGTTGCAATCATCATTCACAGACTGTTATCTTTGGTTGTGCCTTGGTGAGTGA 942 0.3673 MNNNYSDGGNDSSDESHSEDNNDVGNQNEAVDEDLTYEQYKSIIDLTANDIRGMEFGSEEHACKFNDSYARCHGFVARKDDIKRDAEDNIIMRQLVCNKEGLRNKKHFIRLDRKRPHRPITRTSCQAKLRVHFDYKRSKWTVLSFVETHNHYLCPPKYRHLIPAHRKMGDTDKAQAERLHSYGVRTCHIMGYMLAQKGGYSVLGFTKKDMYNYFSEKNREKIKDGDACIALSYLQGKADNNGLMHSSYSFTSDGKLKNLFWADEVSRSDFQCFGDVLAFDTTYKKKQVQQTSSDFLRLQSSFTDCYLWLCLGE. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04108 313 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
Seca4g04108 313 PANTHER OS01G0519700 PROTEIN 51 283 - -
Seca4g04108 313 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04108 Seca-Chr4 73087973 73088914 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g04108 FAR1 6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04108 - - ccaj:109792835 341.273