Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04052 ATGGCAGGAGGAAGCGGAGGAAGAAACTTGGAGGAAACACCTACATGGGCCGTTGCCACTGTTTGTTTTGTTTTGATCTTAATATCTATAATCATCGAGCACATCATCCATCTCATAGGAAAGTGGTTCAAGAAGAAGCACAAAAGAGCTCTGTACGAGTCACTCGAAAAGATCAAATCAGAGCTTATGTTATTGGGGTTCATATCGTTGCTCCTAACGGTAGGACAAGATCCAATATCAAGGATATGTATATCTGAAAAAGCTGCAGGGTCATGGCACCCCTGCAGTAAGGAGGAGGAAGATGAACACCAACCAACTGGCCGGAGATTACTGGCGGCGTTCTTTGGTTCCCAAGGCGGGGGAAATCTCCGACGAGTTTTGGCGGGAGGAGGAGGCGACGACAAATGTGCCGAGGGTAAAGTCCCGTTTGTGTCATCGGATGGTATTCATCAACTCCATATCTTTATCTTCGTGCTAGCTTGTTTTCATGTCGTTTACAGCATTCTCACTATGGCTCTGGGAAGAGCAAAGATGAGAAGGTGGAAGCGATGGGAAGAGGAAACCAAGACGCCCGAGTACCAATTTTCACACGATCCTGAGCGGTTCAGATTTGCGAGGGACACATCCTTTGGGAGAAGACACTTGAGTTTTTGGACCGAAAATCCTGTCCTCATTTGGATTGTTTGTTTCTTTAGGCAGTTTGTACGGTCAGTTCCTAAAGTAGATTACTTGACTTTGAGACATGGATTTATCATGGCCCATTTGGCTCCTCAAAGTCACTCCAAGTTTGATTTTCGGAATTATATAAAACGATCGTTGGAGGAGGATTTCAAAGTTGTTGTAGGAATCAGTCCTGCATTATGGTTCATCGCAGTGTTGTTTCTCCTGTTTAACACTCATGGCTGGTACTCCTACCTATGGCTGCCATTTATTCCTTTGATCATCATCCTATTAGTCGGAACTAAGCTGCAGGTGATCATAACCAAGATGGGTCTCAGAATTCAACAAAGAGGAGAGGTGCTCAAAGGCGTTCCCTTGGTGCAGCCAGGGGATCACTTGTTCTGGTTTAACCGACCAGGCCTTATTCTCCACCTCATCAATTTTGTCCTTTTTCAGAACGCTTTCCAGCTTGCTTTCTTTGCATGGACGGCGCTTGAATTTGGGATTAAATCCTGCTTCCATTCGCATACAGAGGATGCGGTTATCAGAATCTCAATGGGGGTCCTCATTCAATTCCTGTGCAGCTACGTTACTCTTCCTCTCTATGCTCTCGTGACACAGATGGGTTCAACAATGAAGCCAAGTATATTTAATGAAAGAGTAGCCGTGGCTCTAAAGAATTGGCACCAGACCGCAAAGAAGCACATAAAACAGAACCGCGGTGGGTCGTTGTCGGTGACACCAATGTCAAGCAGACCCACAACCCCGAGCCATCCCATGTCTCCGGTTCATCTCTTGCGCTACTACCGTTCCGAATTGGACAGCTTCCCTGCCTCTCCAAGAATATCCAATAACTTTGATGACACCGATTCCCCTTCTCCTTCAAACTCTCACCATAACCAAATGGAAATGGGTTACTTGCCCCGTCAAAACAATGACCCCATCGATGATGATGATGATGTAACCCGCAATGAGATTGTCTATGCACAGAGCAATAGCCATAGCAAGGAATTTTCATTTGATAAAAGAACTACGACCATTAGGTAG 1707 0.4558 MAGGSGGRNLEETPTWAVATVCFVLILISIIIEHIIHLIGKWFKKKHKRALYESLEKIKSELMLLGFISLLLTVGQDPISRICISEKAAGSWHPCSKEEEDEHQPTGRRLLAAFFGSQGGGNLRRVLAGGGGDDKCAEGKVPFVSSDGIHQLHIFIFVLACFHVVYSILTMALGRAKMRRWKRWEEETKTPEYQFSHDPERFRFARDTSFGRRHLSFWTENPVLIWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHSKFDFRNYIKRSLEEDFKVVVGISPALWFIAVLFLLFNTHGWYSYLWLPFIPLIIILLVGTKLQVIITKMGLRIQQRGEVLKGVPLVQPGDHLFWFNRPGLILHLINFVLFQNAFQLAFFAWTALEFGIKSCFHSHTEDAVIRISMGVLIQFLCSYVTLPLYALVTQMGSTMKPSIFNERVAVALKNWHQTAKKHIKQNRGGSLSVTPMSSRPTTPSHPMSPVHLLRYYRSELDSFPASPRISNNFDDTDSPSPSNSHHNQMEMGYLPRQNNDPIDDDDDVTRNEIVYAQSNSHSKEFSFDKRTTTIR. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04052 568 MobiDBLite consensus disorder prediction 457 481 - -
Seca4g04052 568 MobiDBLite consensus disorder prediction 457 478 - -
Seca4g04052 568 Pfam Mlo family 8 489 IPR004326 GO:0006952|GO:0016020
Seca4g04052 568 MobiDBLite consensus disorder prediction 499 540 - -
Seca4g04052 568 PANTHER MLO-LIKE PROTEIN 1 6 503 IPR004326 GO:0006952|GO:0016020
Seca4g04052 568 MobiDBLite consensus disorder prediction 499 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04052 Seca-Chr4 72160867 72167914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04052 8 536 MLO family AT2G39200 60.142 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04052 K08472 - gmx:100782431 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04052 4 72160867 72167914 Seca4g04052 4 72160867 72167914 ECH
Seca4g04052 4 72160867 72167914 Seca4g09183 4 217841436 217842699 PCT