Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04040 ATGACGCAAACTGCACCTTTCAATGTTGTTCAAGTTTGCAGTGTGGCACCGCTACAAGGAACTCCAACCTCTCTTCCACTCACCTTCTTTGATCTCTTATGGCTAAGATTTCCACCTGTTGAGCGTCTCTTCTTCTATGAATACCAAAACTCAACCTCTTCTTTCTTTGACTCTGTTCTTCCAAATCTCAAACACTCCCTTTCACAGACACTCCAACACTTCCTCCCTCTTGCTGGTAACTTCACTTGGCCCCATGACTCTGCCAAGCCCATCATCCAATATGTCCCTGGCGATGCTGTCTCCTTCACCGTTGCTGAATCCAACGCCAGCTTCACCCATCTTTGTTCTGATCTCTGTGAAGCTGCACAACGATACCCCTTGATACCCCACTTGACCACTTCCCATGAACAAGCTTCTGTGATAGCACTTCAAGTCACTCTGTTTCCAAACTCTGGCTTTTGCATAGGAATAACCACACACCATGCGGCTTTTGATGGAAAGTCTTCAACTTCGTTTATGAAATCATGGGCCTATGCATGCTCTAAGCTGGAAGAATCACCATCTTCATCATCATTACCTGAAAAACTAACACCTTTCTTTGACAGATCAGTGATCAGAGACCCTGCAGGGATAGGTGAACTGTACTCAGAGGCATGGTTGAAACATGGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGACTCGCTTAATGCATTACAAACCGATGCAATGAAAGGTTTGTTTGAATTAACACCCTCACATATCCAAAAGCTTAAGCAATATGCACACTCTATGCTGAAAAAGAAGGATCACATATCAACATTTTCAGTGACATGTGCTTATGTATTGGCATGCTTAATCAAAGCACAACAACCAAAGTGCAATAGGTTGGTTTTCATATTTAGTGTGGACTGTAGATCCCGCTTGGACCCTCCAACTCAGCCCACATATTTCGGAAATTGTGTTGCAGGCCAAAAGATTGTGGCTGAGACAAAGAAGTTACTAGAAAAAGATGGATTCATTAGTGCTTTGGAAGGGATAAATGAAGCTTTGAATAGGGTGAAAGATGGAGTGCTAAATGGAATAGAAACTTGGATTTCAACTATTTTAAACGTACCGGAAGACAAAATATACTCTACTGCTGGATCCCCAAGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGGAAGCCTAAAAAGGTGGATGTCACTTCCATAGACAAAACAGGGGCATTTTCCCTTTCGGAGAATAGGAACAATGATGGTGGAATTGAGATTGGTTTGGCGTTGAACAAACCAGAAATGGAAGCTTTTTCTGCCGTTTTTGTTCAAGGACTTGAATCCTTTTAA 1350 0.4244 MTQTAPFNVVQVCSVAPLQGTPTSLPLTFFDLLWLRFPPVERLFFYEYQNSTSSFFDSVLPNLKHSLSQTLQHFLPLAGNFTWPHDSAKPIIQYVPGDAVSFTVAESNASFTHLCSDLCEAAQRYPLIPHLTTSHEQASVIALQVTLFPNSGFCIGITTHHAAFDGKSSTSFMKSWAYACSKLEESPSSSSLPEKLTPFFDRSVIRDPAGIGELYSEAWLKHGGPNNRSLKVWDSLNALQTDAMKGLFELTPSHIQKLKQYAHSMLKKKDHISTFSVTCAYVLACLIKAQQPKCNRLVFIFSVDCRSRLDPPTQPTYFGNCVAGQKIVAETKKLLEKDGFISALEGINEALNRVKDGVLNGIETWISTILNVPEDKIYSTAGSPRFEVYSIDFGWGKPKKVDVTSIDKTGAFSLSENRNNDGGIEIGLALNKPEMEAFSAVFVQGLESF. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04040 449 Gene3D - 7 229 IPR023213 -
Seca4g04040 449 PANTHER - 8 449 - -
Seca4g04040 449 Gene3D - 240 449 IPR023213 -
Seca4g04040 449 SUPERFAMILY CoA-dependent acyltransferases 45 203 - -
Seca4g04040 449 SUPERFAMILY CoA-dependent acyltransferases 245 448 - -
Seca4g04040 449 Pfam Transferase family 23 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04040 Seca-Chr4 71934091 71935440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04040 8 438 Monolignol Biosynthesis Gene Families AT5G48930 25.778 2.49e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04040 - - gmx:100800849 594.734