Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g03986 | ATGGAACCATTTCCAAGAGACCCTCGCGGTTCGCTCGAAGTGTTCAACCCTTCCTCTTCTTACTCCACAGAGAAACCAATCAACTCGCCGTTACGCTCCCAACCGTCGTGGAAAAATTGGATAGACCCACGCGCCAATGACACTGCACAACCACGCGATTCCAATTCCGATGAAGTTACCGCCGGCGACGGCGCTACCTCCTGGATGGCGATCAAGGACCCTACTCCTCCGCCTGCACCGACGCTCGCCGCCGTCCTCGGCGAGGCACTGCCTGCGACCGGCGAATTAGGCTCCGCGGCGGCGCAGAGGGCGGCGGAGTGGGGGTTGGTGCTGAAAACTGACACGGAAACCGGGAAGCCGCAGGGAGTAGCGGTTCGGAAATCCGGCGGCGGTTCGAGGAGGGACTCGAACAACTCCGTGAGGAGCTCCGGCGAATCCTCCGACGACGGTAGGGAACCCCGGGGAATACCGAGGGTTTCGGAGGATTTGAGAGACGCTTTGTCAACGTTTCAACAAACTTTCGTAGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTATGCCAGTGCCGGGTTCTTTAAGATGACGGGTTATACATCCAAAGAGGTCATAGGGAGGAACTGTCGATTTTTACAGGGAGCGGAAACGGATCCAGATGACGTGGCAAAGATAAGAGAAGCGTTACAAGGGGGAACGTCTTATTGTGGAAGGTTACTGAATTACAAGAAGGATGGGACACCCTTTTGGAATCTTCTCACTATTGCGCCTATCAAGGACGACCATGGCAAAGTCCTTAAATTTATCGGAATGCAAGTGGAGGTTAGCAAGCACACGGAGGGGTCCAAGGAGACCATGCTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAAGCAAGCTATTCAGTATCAGAGTTGGTGCAGGCGGTGAGGCGGCCACGGGCACTCAGTGAATCAGGTGGGCGTCCCTTGATAAAAAAGCCATCACGTGGTTACAATGCTGCTGCACAAGAGAAAACAGAGAAACCATCAAGGAGAAAATCCGAAAGTGTGGCTTCATTTAGACGAAAATCACATGCAGGAGACATAACTTCAATGGAGCGTATCTCTGAGCTCCCTGAAAAGAAAAACAAGAACCCACGTCGCCGTTCTTTCATGGGGTTCATCAGGAAAAGTCAGTCCAACTATGAAACCTTCAATGATGAAGAATTTGTTATTGAGGACAGCTCTGAGGCTAGTGAGGATGATGAGAGGCCTGATAGTATTGATGACAAAGTACAGAAGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATCGAGAAGAACTTTGTCATTACTGATCCGAGGCTTCCTGACAATCCCATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACTGAGTATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCGGCAACTGTGAGAAAAATTAGAGAAGCTATTGACAATCAAACAGATGTTACTGTACAGCTCATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTTCATTTGCAACCAATGCGTGATCAGAAGGGAGAGGTCCAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGAAGATACTGCAAAGGAGGGAGAACAATTGGTAAAGCAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTTCCAGATGCTAATTTGAAACCAGAAGATCTATGGATAAATCATACAAAAGTGGTTCACCCCAAACCTCATAGGAAAGATGAAGCTGCTTGGAAAGCTATTCAGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAGGCCAATTAAACCCTTGGGATCGGGAGATACTGGAAGTGTCCATTTGGTGGAGCTATGTGGAACTGGTCAATATTTTGCCATGAAGGCTATGGAGAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACGGAGAGAGAAATCCTTGACATGTTGGATCACCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACCAAAACACATGTTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTGTTCCTGCTTCTTGACCGACAGCCAACAAAGGTTCTCAAGGAAGATGCAGTGAGAGTTTATGCCGCTGAAGTAATTGTTGCATTGGAGTACCTTCATTGTCAAGGGATAATATATCGGGATTTGAAACCAGAAAATGTGTTACTCCAGAGCAGTGGACATGTGTCTCTCACAGATTTTGATTTGTCATGCTTAACATCTTGCAAACCACAGCTTCTAATTCCAGCTACAAATGAAAAGAAGAAACAGCACAAATATCAACAGGCTCCAATATTTATGGCTGAACCTATGAGAGCATCGAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGTTTTATGGTTATACACCATTCAGGGGAAAGACTAGGCAAAAAACATTTACAAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTGAGAGATTCTTCTCCAGCACCACCTAGTGTTCACACTAGTTGCTTGCAGGTAACTCTCAGTGCAAAACAGTTAATATACCGCTTGTTGCAGAGAGACCCCAATTGCAGATTGGGTTCAAAGGGAGGAGCAAATGAAATTAAGCATCATCCCTTCTTCCGGGGTGTCAACTGGGCCCTAGTTCGCTGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTCCGAGACAACTGAAGAAGAAAAGGAAGCTAAATATGTTGATCCTGGGCAAGAGGATATGAATGTCTTCTGA | 2970 | 0.4603 | MEPFPRDPRGSLEVFNPSSSYSTEKPINSPLRSQPSWKNWIDPRANDTAQPRDSNSDEVTAGDGATSWMAIKDPTPPPAPTLAAVLGEALPATGELGSAAAQRAAEWGLVLKTDTETGKPQGVAVRKSGGGSRRDSNNSVRSSGESSDDGREPRGIPRVSEDLRDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGAETDPDDVAKIREALQGGTSYCGRLLNYKKDGTPFWNLLTIAPIKDDHGKVLKFIGMQVEVSKHTEGSKETMLRPNGLPESLIRYDARQKEKASYSVSELVQAVRRPRALSESGGRPLIKKPSRGYNAAAQEKTEKPSRRKSESVASFRRKSHAGDITSMERISELPEKKNKNPRRRSFMGFIRKSQSNYETFNDEEFVIEDSSEASEDDERPDSIDDKVQKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGEQLVKQTAENVDDALRELPDANLKPEDLWINHTKVVHPKPHRKDEAAWKAIQKILESGEQIGLKHFRPIKPLGSGDTGSVHLVELCGTGQYFAMKAMEKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRVYAAEVIVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLIPATNEKKKQHKYQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKTRQKTFTNILHKDLKFPKSKQVRDSSPAPPSVHTSCLQVTLSAKQLIYRLLQRDPNCRLGSKGGANEIKHHPFFRGVNWALVRCTKPPELDAPLSETTEEEKEAKYVDPGQEDMNVF. | 990 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g03986 | 989 | MobiDBLite | consensus disorder prediction | 112 | 157 | - | - | |
| Seca4g03986 | 989 | NCBIfam | PAS domain S-box protein | 185 | 279 | IPR000014 | - | |
| Seca4g03986 | 989 | NCBIfam | PAS domain S-box protein | 466 | 556 | IPR000014 | - | |
| Seca4g03986 | 989 | CDD | STKc_phototropin_like | 640 | 967 | - | - | |
| Seca4g03986 | 989 | ProSitePatterns | Protein kinases ATP-binding region signature. | 648 | 671 | IPR017441 | GO:0005524 | |
| Seca4g03986 | 989 | MobiDBLite | consensus disorder prediction | 320 | 393 | - | - | |
| Seca4g03986 | 989 | SUPERFAMILY | Protein kinase-like (PK-like) | 626 | 966 | IPR011009 | - | |
| Seca4g03986 | 989 | CDD | PAS | 456 | 556 | IPR000014 | - | |
| Seca4g03986 | 989 | FunFam | Putative LOV domain-containing protein | 173 | 329 | - | - | |
| Seca4g03986 | 989 | Pfam | Protein kinase domain | 644 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Showing 1 to 10 of 41 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g03986 | K20715 | - | gmx:100804524 | 1617.82 |
Showing 1 to 1 of 1 entries