Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03955 ATGCCAAGAAAAGGAATGAGAAGCATCTTCTTCAAACCATCACCTCCATCTACTTCGCCATTGCCACCTTCCTCTCCTCTCCGCACCTTCTCAGACTCCATAATGGAAGAAAACATCGAAACCGCAGAGTTGCTCATAACCAAATGGGACACCAACCAATCAAAAATCATCACCCCTCTTTTCAGCGGCACCCGTGAGGAAGCCAAACAGTACCTAAACGCCGTCAAGGGACTACAATCCGCTATGCAGTACCTCGTCACACGTGATTCCACCTCCAACACGCTCGTGCGAGCTCAGTCCTTAATGCAACTCGCCATGAAAACGCTCCAGAAGGAATTCTACCAGATACTATCCGCAAACAGGGATCACTTAGACCCTGAAACCGTCTCCGCCCGTTCCTCCGTCGACCACAGAAGCAGCGTCTCCGATTACGACGACGAAATCTCCGAGGACGAGTTTCGCGTTGCTGGAAACTCCATCTCCGAGACGGAGAGGGTTTCCATGCTCACCATGGCGGATTTGAAGGCCATCGCCGATTGCATGATTTCCTCCGGCTACGGCAAGGAGTGCGTCAAGGTTTACATCATCATGAGAAAATCGATTGTGGATGAGGCACTGTATCATCTCGGAGTTGAACAATTGAGTTTTTCTCAGGTCCAGAAGATGGATTGGGAGGTGCTGGAGTTGAAGATCAAGAGCTGGTTGAACGCCGTGAAGGTCGCCGTCGGGACTCTGTTCTACGGCGAGAGGATCCTCTGCGATCACGTCTTCGCCGCGGCTTCGGGGAAGAGAATCCCTGAGTCCTGTTTTGCAGAGATTACCAGACAGGGCGCTGAAATGCTGTTTGGATTCCCGGAAATGGTGGCAAAATGCAAGAAAACACTCGAGAAAATGTTCAGGACTTTGGATTTATACGAAGCCATCTCTGACCACTGGCCACAAATCGAGTCCATCTTTTCCTTCGAATCAACCTCCAATGTCCGTTCTCAGGCCGTTACGTCCTTGGTAAAACTCGGTGAGGCCGTTAGAACGATGCTAACGGACTTTGAATCGGCGATTCAGAAGGATTCCTCGAAGAAGCCGGTCCCTGGTGGCGGCGTTCATCCCCTCACGCGCTATGTCATGAACTACATCACCTTCCTCGCCGATTACAGCGGCGTGCTCGCTGATATCGTCGCCGATTGGCCGCAATCTCCGTTGCCGGAGTCTTACTATCGAAGCCCCATGCGCGAGGAAAACCCGTCGTCTTCGGAGATATCGGAGCGGATCGCGTGGCTTATACTCGTCGTGCTCTGCAAACTTGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCTTTCTTACCTTTTCTTAACCAACAACATGCAATACGTCGTCGTAAAGGTTCGCAAATCGAACCTAGGGTTCCTCCTCGGCGAGGATTGGTTGGCGAAGCACGAATTGAAGGTTAGAGAGTACGTGTCCAAGTATGAACACGTGGCGTGGAGCAGAGTGTTGTCGGCGTTGCCGGGAAATCCATCGGCGGAGATGCCGGCGGACAAAGCCAGGGCCTGCTTCGTGAGCTTCAACGCCGCGTTCCATGAAGTGTGCAAGAAACAGTCTTCGTGGATCGTATCCGACCCGAAACTGAGAGACGAAATCAAAGTGTCGATAGCTTCGAAGCTGGAGCACAAGTACAGTGAATTCTTCGAGAAAAATCGGGTCGGATCGGAAGCAGTTATAAGTTTTTTGCCCGATGATATTGGGAATTACTTGTCTGACATTTTGTATGGGATTGGAGATTCGGGTAGCGTCTCATCACATTCTTCGTCGACGACGTCGTCTTCACATCGCTCCAATCGCCGGTGA 1848 0.5152 MPRKGMRSIFFKPSPPSTSPLPPSSPLRTFSDSIMEENIETAELLITKWDTNQSKIITPLFSGTREEAKQYLNAVKGLQSAMQYLVTRDSTSNTLVRAQSLMQLAMKTLQKEFYQILSANRDHLDPETVSARSSVDHRSSVSDYDDEISEDEFRVAGNSISETERVSMLTMADLKAIADCMISSGYGKECVKVYIIMRKSIVDEALYHLGVEQLSFSQVQKMDWEVLELKIKSWLNAVKVAVGTLFYGERILCDHVFAAASGKRIPESCFAEITRQGAEMLFGFPEMVAKCKKTLEKMFRTLDLYEAISDHWPQIESIFSFESTSNVRSQAVTSLVKLGEAVRTMLTDFESAIQKDSSKKPVPGGGVHPLTRYVMNYITFLADYSGVLADIVADWPQSPLPESYYRSPMREENPSSSEISERIAWLILVVLCKLDGKAELYKDVALSYLFLTNNMQYVVVKVRKSNLGFLLGEDWLAKHELKVREYVSKYEHVAWSRVLSALPGNPSAEMPADKARACFVSFNAAFHEVCKKQSSWIVSDPKLRDEIKVSIASKLEHKYSEFFEKNRVGSEAVISFLPDDIGNYLSDILYGIGDSGSVSSHSSSTTSSSHRSNRR. 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03955 615 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g03955 615 Gene3D Exocyst complex component Exo70 45 594 - -
Seca4g03955 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 585 IPR004140 GO:0000145|GO:0006887
Seca4g03955 615 MobiDBLite consensus disorder prediction 596 615 - -
Seca4g03955 615 FunFam Exocyst subunit Exo70 family protein 54 597 - -
Seca4g03955 615 Pfam Exo70 exocyst complex subunit 232 587 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca4g03955 615 SUPERFAMILY Cullin repeat-like 41 587 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03955 Seca-Chr4 69859988 69861835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03955 10 591 EXO70 exocyst subunit family AT5G59730 50.164 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03955 K07195 - gmx:100808078 937.947