Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03946 ATGATTTGTGAGTCCCTCTTATTAGCTCTCATTCTCTTTGTTTGTGTTTTCCTTCTCCAACTCCTCTTCTATAAGAGAAACAACAAACCAAAGCCCCATTTGCGTCACCCTCCAAGCCCACTTGCAATACCCATAATTGGCCATCTCCATTTGCTTAAACCCATCATCCATCAAACCTTCCGAGACCTTTCCCACCAATATGGCCCTCTTTTTTCCCTTCGAATTGGCTCTGTTCAATTCATTGTTGCCAGCACCCCATCACTCGCTAAAGAGTTTCTTAAGACAAATGAGCTCACATATTCTTCTCGTAAGAAGAACATGGCCATTAACATGGTTACCTACGAAAATGCCACTTTTGCTTTTGCCCCTTATGACACATATTGGAAATTCATCAAAAAGCTTAGCACCATTGACCTCTTAGGCAACCGAACCCTTGGACACTTCCTTCCAATTCGGACCCAGGCAGTCCATGAATTTATTCATACTTTAGTGGTTAAATCAAAGGCCAAAGAGAGTGTGAACCTCTCTCAAGAATTGTTGAAGCTTTCTAACAACATAATATCACAGATGATGTTGAGCATCAAGAGCTCTGGAACAGACAGCCAAGCAGAACGGGCAAGGGCTCTGGTTCGTGAGGTGACGCAGATTTTTGGGGAATTTAATGTATCAGATTTCATTGGATTTTTCAAAAACATGGATTTGCAAGGTTTCAAAAAGAGGGCCATGGACATACACCAGAGGTATGATGCTTTGTTGGAGAAGGTCATCTCTGATCGCGAGGAATCAAGAAGGAAACCAAAAGTAGATGCTTGTGAAGATGGAGAAGAGAAAGTGAAGGATTTTCTTGACATTTTACTTGATGTCTCCGAGGAGAAAGATTGTGAGGTCAAGTTAACAAGGAATCACATTAAATCATTGATCTTGGTAAATAGATTCTCCTCATCACCCGATTACTTTACGGCAGCCACCGACACAACGACCATCTCAGTGGAATGGGTAATAGCAGAACTGTTCAACAATCCAAAGGTGATGAAGAAAGCTCAAGAGGAGATAGATAGAGTTATTGGGAATGAACGATTAGTGTGTGAAGCAGATAGTTCAAACCTTCCTTATATCCATGCCATCATAAAAGAAACAATGAGGCTTCATCCCCCAATACCAATGATTATGAGGAAGGGAATTCAAGATTGTGAGGTTAATGGATACATGATTCCAAAAGACTCAATAATATGCATAAACATTTGGGCCATGGGAAGGGACCCAGAGATATGGAAAAGCTCGTTAGAGTTTAATCCAGAGAGGTTTATAGAAGGAGAAAGGAGTGCTATAGATATCAAAGGCCATAACTTTGAGTTGTTGCCATTTGGTTCTGGAAGAAGAGGTTGCCCTGGCATGCCTTTGGCCATGCGAGAATTACCCACCATAATTGGAGCTTTGATACAATGCTTTGAGTGGAAGATGCTCAATTCGGAAGGTAAAATCTTAGACCATGGTAAGACAATTGATATGGATGAACGACCAGGATTGACTGCTCCTAGGGCCAATGATCTTATTTGTATTCCAGTTGCACGATTCAATCTCACTCCTTTTCTTCAAGTGGTGTAA 1605 0.4131 MICESLLLALILFVCVFLLQLLFYKRNNKPKPHLRHPPSPLAIPIIGHLHLLKPIIHQTFRDLSHQYGPLFSLRIGSVQFIVASTPSLAKEFLKTNELTYSSRKKNMAINMVTYENATFAFAPYDTYWKFIKKLSTIDLLGNRTLGHFLPIRTQAVHEFIHTLVVKSKAKESVNLSQELLKLSNNIISQMMLSIKSSGTDSQAERARALVREVTQIFGEFNVSDFIGFFKNMDLQGFKKRAMDIHQRYDALLEKVISDREESRRKPKVDACEDGEEKVKDFLDILLDVSEEKDCEVKLTRNHIKSLILVNRFSSSPDYFTAATDTTTISVEWVIAELFNNPKVMKKAQEEIDRVIGNERLVCEADSSNLPYIHAIIKETMRLHPPIPMIMRKGIQDCEVNGYMIPKDSIICINIWAMGRDPEIWKSSLEFNPERFIEGERSAIDIKGHNFELLPFGSGRRGCPGMPLAMRELPTIIGALIQCFEWKMLNSEGKILDHGKTIDMDERPGLTAPRANDLICIPVARFNLTPFLQVV. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03946 534 PANTHER STEROID 21-HYDROXYLASE-RELATED 16 514 - -
Seca4g03946 534 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 FunFam Cytochrome P450 family protein 28 519 - -
Seca4g03946 534 CDD CYP93 68 521 - -
Seca4g03946 534 SUPERFAMILY Cytochrome P450 37 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Seca4g03946 534 Gene3D Cytochrome P450 22 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03946 534 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03946 Seca-Chr4 69651042 69653069 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03946 8 524 Cytochrome P450 AT5G06900 39.692 8.43e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03946 K23179 K24188 gmx:100783503 848.966