Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03926 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATTCGATAATTTAGAAGATGCATGGAAATTTTGGGTGAATTACGGAGGCATAAAAGGTTTAGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAATATGGTTCCATTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAAACCAGACTCAAAGGATTATAAAACGACCAATCCAAAACCTGAGACAAGAACGAGGTGTATGGCAAGAATGAAAGTCAAATGA 267 0.3521 MDTNLTLKVGLEFDNLEDAWKFWVNYGGIKGLGVRKQYSSKSKKYGSITSYLYVCCKEGVRKPDSKDYKTTNPKPETRTRCMARMKVK. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03926 88 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 88 - -
Seca4g03926 88 Pfam FAR1 DNA-binding domain 21 88 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03926 Seca-Chr4 69281804 69282070 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g03926 FAR1 6.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03926 - - vun:114184605 150.599