Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03923 ATGGTAAAGGGTTCTGGACACGCTAATGACAGAGCGACAGTATTTGATAATCCTTCCAAAATTGAATCAAAACGACCTCATCAATGGTTTGTCGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCAGTAGAAGATGCAAATGAAAAATCTAGTTCAGGATTTTCAAATGTGAATTTTACTCCCTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAGCCAATTTATCAGTCGGTTATTTGGGTCTGAAACTAGGTCTGTCAATATCACTGAAAAGAATGCATCTTATGTTTCGGCTGATGATTCTAATGTGAGATCAAAGATGATAACCAATCAATATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCTGTTGAAGATTCTGAAGCATGCCCAAATTTTGGTGGAATAAAAAAAGTCCAAGTGAATCAGGTTAAGGATTCTGATGATGTACAGGCTCTAGAGGGACATAATTTTAATAGGCAGAGTAATGGTGATCTACATAAGGCCTATAACGGGGAAGTTGAGACCAGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATGGTAATGTCACTTTAATGGGACTCACCTACAGCAAAGGGGATGCCCATGTCAGATCATTTGATGCCCCCTTTGGCAAAGGAGATGACACAGTCATATCAATTGGTGAATCCTATAATAAAGAGGACACTAATATAATATCTTTTGGTGGGTTCTCAGATGAACGGGACATTATCTCTGTGGGCAGGCCTGCTACAGACTATGAACAATTATATAATCAATCTTCTGTCCATGTGTCAACAACAGCTCATGAGAAAGAGTTGGATGCATCAAATTCTGATGCAGTTGCAAGTACTCCTCAGGTAGCAACAGTGAAGTCTGGAACTGTGTCCAAGAATAAACAAGAGTTCAAAACAACCAGGAAAGAAGCTCCAAACAGCTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGCGTTCCTATTAAGTATGTCTCAGTGGCACGAGAGGAACTTCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCCTGTAACCATTCTAAGGTTCTGAATGCTTATGAGTTTGAGAGACATGCTGGTTGCAAAACGAAACATCCAAATAATCACATTTACTTTGAGAATGGGAAGACTATTTATCAAATAGTACAGGAATTGAGGAGCACCCCTGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGATCACCAATTAATCAGAAAGCATTTCGCAATTGGAAAGAATCATTTCAAGCAGCTACACGTGAGCTTCAACGCATTTATGGAAAGGAAGAATTTAACTTATAA 1371 0.391 MVKGSGHANDRATVFDNPSKIESKRPHQWFVDAAEVDFFPNKKQAVEDANEKSSSGFSNVNFTPWENNPNFHSVPSQFISRLFGSETRSVNITEKNASYVSADDSNVRSKMITNQYGDDASFGLSISHSVEDSEACPNFGGIKKVQVNQVKDSDDVQALEGHNFNRQSNGDLHKAYNGEVETRSASIGQAFDKDGNVTLMGLTYSKGDAHVRSFDAPFGKGDDTVISIGESYNKEDTNIISFGGFSDERDIISVGRPATDYEQLYNQSSVHVSTTAHEKELDASNSDAVASTPQVATVKSGTVSKNKQEFKTTRKEAPNSFPSNVRSLISTGMLDGVPIKYVSVAREELRGIIKGSGYLCGCQSCNHSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGSPINQKAFRNWKESFQAATRELQRIYGKEEFNL. 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03923 456 MobiDBLite consensus disorder prediction 276 318 - -
Seca4g03923 456 PANTHER AUTOIMMUNE REGULATOR 13 169 - -
Seca4g03923 456 Pfam Tify domain binding domain 351 406 IPR032308 -
Seca4g03923 456 MobiDBLite consensus disorder prediction 285 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03923 Seca-Chr4 69251557 69254795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03923 311 439 PHD Transcription Factor Family AT3G53680 54.615 7.24e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03923 - - gmx:100819317 808.905