Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03896 ATGGCTGGGAAAGGCGAGGGTCCGGCGATCGGAATCGATTTGGGAACGACTTACTCTTGCGTTGGTGTTTGGCAGCACGATCGTGTTGAAATCATCGCCAACGATCAGGGTAACAGAACCACTCCATCCTATGTGGCTTTCACTGACACAGAGCGCTTGATCGGCGATGCGGCCAAGAACCAGGTCGCTATGAACCCAACCAACACTGTTTTTGGTAAGTACTTTCAGAGTCATCTCTTGTATCTTGTTTTTCTGCGTTTTTTACTATCTATTACAAGTGATTCTGTAACATAA 294 0.466 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFGKYFQSHLLYLVFLRFLLSITSDSVT. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03896 97 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca4g03896 97 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca4g03896 97 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca4g03896 97 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Seca4g03896 97 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
Seca4g03896 97 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca4g03896 97 FunFam Heat shock 70 kDa protein 1A 2 88 - -
Seca4g03896 97 SUPERFAMILY Actin-like ATPase domain 8 72 IPR043129 -
Seca4g03896 97 Gene3D - 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03896 Seca-Chr4 68574909 68575202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03896 1 71 Calmodulin-binding Proteins AT5G02500 95.775 2.95e-46 153