Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03883 ATGGGTAACGGGATAGGAAAGCTAACGGTGTGCTTCACGGGAAACGGAGGAGGCGGCGGTGGCCGGAAACAGGACATATCTTTCTTGATAACGGAGCCACTGGACGAGGGGCTGGGTCACTCTTTCTGCTATGTTAGACCCGACCCGACCCGGATATCGTCGTCGAAGGTCCACTCGGAAGAAACCACGACTTTCAGAACGATCTCCGGCGCATCTGTGAGCGCGAACACTTCGACGCCGTTATCGACGGCGTTTGTGGACCTTTACTCCTACGGTTGCATTGATAGAGCTGCGGCTTTCGAGAGTTCAACCTCCTTTGCTTCGCTTCCTCTGCAACCTGTTCCCAGATATATGATGAATTCGGGTCCCTTTTCAGGGAACCTTGGAGGTGGGTTTCCGAGTTCGGGTCCTCTGGAGAGAGGGTTCATGTCGGGTCCGATTGAACGCGGGTTCATGTCGGGTCCTATTGATCGTGGGTTGTTTTCGGGTCCGATGGAAAAGGATAGCTCTGACCAGTTTCAGAGAAGCTTCTCACATGGTGGTTTGGGTTTTACCGTGAGACCCAGGTCAAGGAAGGGTCGGTGGATTCGGGTTCTTCAGAGGGCGATATCGAAGACTCTGTCTCGGGGGCAGAACTCAATCGTTGCTCCGATCAAAGGTGTGGTGGTGAAGGAACCGGAGTGGATGGTTTCAGCGGAGAAGCACAATGAGAATTTGACGGTAAGTAGTGTTAATTTGAGCAGTGAGGGTAGTTTGGAAGATGATGATTCAATGGAAAGTCAGAATCTTCAGTGGGCTCAGGGGAAAGCAGGGGAGGACCGTGTTCATGTTGTGGTGTCAGAGGAACACGGTTGGGTTTTCGTGGGGATCTACGATGGTTTCAACGGTCCTGATGCACCTGATTATTTGCTTTCAAATCTTTACACCGCCGTGCACAAGGAACTGAAGGGTTTGCTGTGGGATGATGGGTCTGCGCCAGAGAATTCGAATTTGGAAGCGCAAGATTCGATTCCAATCGGTGATGTTGTTGGGAAAGAGGACAGGTTGGGAGATGCTTGTTCTCAGTGTGTTGAGCAAGAGAATAACAATCGTGGTTGCGCAAGTGGTGGTGGGGATGCGGTTTTGAAGAGAAAAAGAGGTAAGAATTCCAAGAACAAGTACAAAGGTGGAGTGAGGAAAAGAGAGGAGAATCAGAGGTGGTGGAAGTGTGAATGGGATCGAGAAAGATTAGAGCTTGATAGAAGATTAAAGGAGCAACTAAGTCTAAGTCGATCTGGGTCTGGTTCCACTACCTCTATTAATCATTCAGATGTGTTGGAAGCTCTCTCTAGGGCTCTCAGGAAAACGGAGGAGTCTTATCTTGATGTTGCGGATAAGATGGTCACAGAAAATCCTGAACTTGCTTTGATGGGTTCATGTGTTCTTGTGATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTGGGTCAAAAGGCTGAGCCTGATTACTGGCTTGGGAAAATCAGACAGGACTTGGAGAGGATCAATGAAGAGACAATGAATGATCTTGAATCATGGGATGCTGATACAACAAACGTGGTTCCCAGTCTAAATGCCTTTCAGCTTACCAAGGATCACAGTACCAATGTTGAAGAAGAAGTTCTCAGAATAAGAAAAGAGCACCCTGATGATCCTTGTGCTGTGGTAAATGATCGTGTGAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTAGGAAATTCTCCTTACATAAGCTGCTTGCCATATCTAAAACACCACAGATTAGGACCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACGTTACAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGTGTTTGGACTTTCACGAATTGCTCGAAATTCCACAAGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATAG 2115 0.4752 MGNGIGKLTVCFTGNGGGGGGRKQDISFLITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPVPRYMMNSGPFSGNLGGGFPSSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGLGFTVRPRSRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVVVKEPEWMVSAEKHNENLTVSSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSNLEAQDSIPIGDVVGKEDRLGDACSQCVEQENNNRGCASGGGDAVLKRKRGKNSKNKYKGGVRKREENQRWWKCEWDRERLELDRRLKEQLSLSRSGSGSTTSINHSDVLEALSRALRKTEESYLDVADKMVTENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLGQKAEPDYWLGKIRQDLERINEETMNDLESWDADTTNVVPSLNAFQLTKDHSTNVEEEVLRIRKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGVWTFTNCSKFHKVIGVVTMMMFPS. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03883 704 CDD PP2Cc 434 672 IPR001932 -
Seca4g03883 704 PANTHER PROTEIN PHOSPHATASE 2C 252 676 IPR015655 GO:0004722|GO:0006470
Seca4g03883 704 Pfam Protein phosphatase 2C 437 670 IPR001932 -
Seca4g03883 704 MobiDBLite consensus disorder prediction 241 267 - -
Seca4g03883 704 Coils Coil 510 530 - -
Seca4g03883 704 ProSiteProfiles PPM-type phosphatase domain profile. 255 704 IPR001932 -
Seca4g03883 704 SMART PP2C_4 256 699 IPR001932 -
Seca4g03883 704 SUPERFAMILY PP2C-like 269 674 IPR036457 -
Seca4g03883 704 Gene3D - 228 689 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03883 Seca-Chr4 68296147 68299790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03883 1 696 PP2C-type Phosphatase Gene Family AT1G07630 67.373 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03883 - - gmx:100812903 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03883 4 68296147 68299790 Seca4g03883 4 68296147 68299790 ECH