Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03880 ATGGGAAAGCATTTGCTTTCTTTCCAGAATTCCACTGTTCAATTTCAGGATAATCATCCAGGATGCATGTGGGGCATACTTCAAATTCTTGACTACCATCATTGGCACTATTTCAGAAACGTGTTCCCTCACAAAAAGCATTACTCAAGAAGACATGCCAGATATAAAAGAAAAAAGATTTTGCATAGCCATGACGAAGACCATCAATTTGGAATTGCAGAAGAAGAACCCCTCTTATTGAGGCAACACAGCCAAAAATTGAATGCTACAATCAAAAGTTCTCCCAGAAGTAGAAAAAAAGGATCACGAACTGAAAATGGTTGTTCTAAAGAAAAAAACTCCAAAGATTGGATCATTAGCTTTCACCATGAATCTCAACATTTGGAGTCTTCACATAAATGTGTCAAGTGTAAAGCCTATGGTGCCAAAGGAGACATGGACTACTCAGAGCAAAACCAGGCCACAAGTGAGCATGCACTTCATCTGGAGAAAAATGGCAACATAACAGAAGCTACGCTTAACCAAAAGCTAATGGAAGCAAAGAAGTTTGACCAAGATATTTCCATTAAATCTGAGAAGCATCTTGATGTTTTGGAGGTATTTAGAGTGGATAAGGATTTGTTTCTGGAATTTTTACAGGATCTAGATGTTGGTGGGAAAAACTTTCATCAGACTTCTAATAACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTCTAACTTCACAGATGAGAAACATTAGTCCTAGTACCTTCAAACACAAGCAAACCGAAATTTGGGCCTTTCCCAAAGGGCAAAAGTTACTAGCTGGTGCTCGAGCACAAAAATTATTTGCATCCAGTTCTGCAAAAGACATTCCTTTTGTGAAGCCAATTCCTTTGGAGAGTGATCTTAGTGTGGACAGTGACATGAAACATAAACCAAGCTTTTCTTCTTCAAGCTATTCTCAAGGATTAAATCTCAGAGGGTGGAATCAAATGGTTCTTCATCGTTTCAAAATTATAAAACAGAAGATAAAACATGCTATTATGGACTTCAAGAAAAGCAGTTACCAAACTTCTGTTGAAAATATCCACCACAGAGCTTCATCTGAATGTAGGATTGTCAATAATGAGAAGGGGTCACCAAGCTTAGATGATGGCGTGATTCAAGATCAAGAGTATATAAAGAATACAAGCTCAGATGAGACTGAAGCTCGCCTCATGAGAAGAGCTTCCTCTCTAAATGAATCTATGGATAGATACATTTGGTTGTTTGAGCAAAGCTTCAACAAAGACATCAAGTGGCAGAACTCAATGTCTAAAAGCTTGAAATTGGCAAATGAGGATAAGGATAACATGAGTGGTTGTGCTTCAAAGTCTTCCAGAAGGAATTTGTCTCTGCCTAATCTCGAGTCTTTAAGCTTCCTTGTACATGAGGCACTTTCTGATACAGATGATATAGGGATCACAGTGGAAACTGATATTCATATTCAAAGAAAATCAGTTAGTGTTCCTTTAGATAGAGACAAGTCACTTGATCATCTTACAGAGACTGAAATGGTGGAAACAGTAGAGAAATGTGGCAGGGATGTGAATCCTAGTCCTTTATCTGGTAAGATTGCAGTGGGAGATGGAATTTGTCCAGTTCCCCTAGAAAAAGTGGAAACAAGCATGAATATCTATCCTAACAAGGAGGCAATAATGGCAACTCCTGAATCAAGCTATGATTGCAATAAAATCAGCCATGCAGAAGGTAGAGAATTAAGTACCAGAGGATCTAGCATGGATGAATTGTTGACTGAGTTACCAAATAAAGCAAGTGTATATTCTTGGCCTAGCACTATTAGCAACACAAATACTAGAGCAATAGCTAAAGCCCCAAAAATCAAATCAGAAACAATCAATGATTCTAATTTCAAATATGTGAAAGATGTTCTTGAATTTTGGGGCTTCAGGGGAAATGAGGATATTCAAATGTGGAATACAGTAGACCAGCCACTAAAGCCCTCCTTACTAATGGATTTGGATCGAACTTTGTTCAATAAAATTGAATCCTCTGGAGAAGAGAGTATCAGCCCCTATCATTACCAGCTTCTTTTTAATGTAGTTAACGAAGTTCTTCTTGAAATATATGAGAGATCACCATGTCACTTCCCAAGGCCCTTCTCCAACAGCTGCCACCGTTCAATGTATAGGGAGAACTATCTTCTAAATGAAGTGTGGACTAGAGTTAGCTCATACCTGAGCTTGAGGCCAGAGCTAGATAGGACATTAGATGATGTTGTGGGTCGAGATTTGGCAAATGGTAGTGGGTGGATGAACCTCCAACAAGAAGAGGAATGTGTAGCTCTTGAACTAGAGGAGATGATTGTTGAAGATTTATTAAATGAAGTTATCTTCTCATGA 2388 0.3836 MGKHLLSFQNSTVQFQDNHPGCMWGILQILDYHHWHYFRNVFPHKKHYSRRHARYKRKKILHSHDEDHQFGIAEEEPLLLRQHSQKLNATIKSSPRSRKKGSRTENGCSKEKNSKDWIISFHHESQHLESSHKCVKCKAYGAKGDMDYSEQNQATSEHALHLEKNGNITEATLNQKLMEAKKFDQDISIKSEKHLDVLEVFRVDKDLFLEFLQDLDVGGKNFHQTSNNKARLTKSGSFPLTSQMRNISPSTFKHKQTEIWAFPKGQKLLAGARAQKLFASSSAKDIPFVKPIPLESDLSVDSDMKHKPSFSSSSYSQGLNLRGWNQMVLHRFKIIKQKIKHAIMDFKKSSYQTSVENIHHRASSECRIVNNEKGSPSLDDGVIQDQEYIKNTSSDETEARLMRRASSLNESMDRYIWLFEQSFNKDIKWQNSMSKSLKLANEDKDNMSGCASKSSRRNLSLPNLESLSFLVHEALSDTDDIGITVETDIHIQRKSVSVPLDRDKSLDHLTETEMVETVEKCGRDVNPSPLSGKIAVGDGICPVPLEKVETSMNIYPNKEAIMATPESSYDCNKISHAEGRELSTRGSSMDELLTELPNKASVYSWPSTISNTNTRAIAKAPKIKSETINDSNFKYVKDVLEFWGFRGNEDIQMWNTVDQPLKPSLLMDLDRTLFNKIESSGEESISPYHYQLLFNVVNEVLLEIYERSPCHFPRPFSNSCHRSMYRENYLLNEVWTRVSSYLSLRPELDRTLDDVVGRDLANGSGWMNLQQEEECVALELEEMIVEDLLNEVIFS. 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03880 795 Pfam Protein of unknown function (DUF3741) 174 214 IPR022212 -
Seca4g03880 795 PANTHER PROTEIN TRM32 1 795 IPR044257 -
Seca4g03880 795 MobiDBLite consensus disorder prediction 88 111 - -
Seca4g03880 795 Pfam Domain of unknown function (DUF4378) 633 791 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03880 Seca-Chr4 68243711 68249091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03880 170 784 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.457 4.18e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03880 - - gmx:100784103 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03880 4 68243711 68249091 Seca4g03880 4 68243711 68249091 ECH