Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03877 ATGCCTAATAAGAGCTTGGAAGACCATCTTTTGGCTCGAGTACCGTCCACACATCTCCCATGGACGACAAGATTAAAAATTGCTCAAGATGCTGCTCGTGGTTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAGACATCCAACATCTTGCTGGATGGGGACTTCAATGCAAAACTTTCCGATTTTGGACTTGCTAGGCAAGGACCCTCAGAAGGGTCTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCAGCACCAGAGTATGTTCAGACTGGTAAGCTGACAGCTAAGAGTGATGTCTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACCTACCAAGAAATGAACAAAAGCTTTTGGAGTGGGTAAGACCATATGTTTCTGATCCAAGGAAGTTCCATCTTATTGTAGACCCTCGACTTGAAGGACAGTATTGCATCAAATCAGCTAATAAACTTGCAATCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCCCGTCCAAAAATGAGTGAGGTGGTTGAGATTCTTGGAAACATAATTAGTGAGACAGTTCCTCAGGATGAATGCATCCCCCAAGCAAGTGGAGAAGAAAAAGAAGCGAAGTTATCTGTAGAGGAGGACACTGAAGCTGAACCAACTAAACAGGGGAATAATTATCTGAAGAAGGTTCTTGAATTCAAAGACATGGTCAGCTTAAGAAATAAATCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAACTTGGTGA 825 0.4279 MPNKSLEDHLLARVPSTHLPWTTRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDGDFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDPRKFHLIVDPRLEGQYCIKSANKLAILANKCLMKQPKSRPKMSEVVEILGNIISETVPQDECIPQASGEEKEAKLSVEEDTEAEPTKQGNNYLKKVLEFKDMVSLRNKSIGRLDWKSWAPGLVRTW. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03877 274 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 210 - -
Seca4g03877 274 MobiDBLite consensus disorder prediction 216 235 - -
Seca4g03877 274 Pfam Protein kinase domain 3 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03877 274 SUPERFAMILY Protein kinase-like (PK-like) 1 207 IPR011009 -
Seca4g03877 274 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Seca4g03877 274 MobiDBLite consensus disorder prediction 216 233 - -
Seca4g03877 274 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03877 274 PANTHER OS01G0588500 PROTEIN-RELATED 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03877 Seca-Chr4 68210476 68214094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03877 1 232 Glycoside Hydrolase AT3G07070 48.319 1.28e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca4g03877 Pkinase 7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03877 - - gmx:100305425 483.796