Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03867 ATGGATCCTCATATCAAGTCCAATTTCATCAACGGTATTAAATTCAACCAAGTGCCTAATACGCTCGATGTAGAGGATCATAGCTTTGGATTCTTAGATAACCCGTTTCTTCTTCCACCTGATCCAAACAATGCCATTACCACGGAAGAGGACTCTCCCTTGGATGAAATTGATTTCTCTGCCACCGTCCTGCGCTACATAAACCAAATGCTTATGGAGGAGAACATGGAGAAGAAGACCTGTATGTTCCATGATTCCTTAGCTCTCCAAGCTGCTGAGAAATCTTTTTATGAGGTCATTGGTGAGACATACCCTTCTTCTTCCATCCAAAACTATCACAATGTGGAGAGCCCTGATGGCAGTCTTAGCAGTAACTTCAGTGTTGAGTCCCACTGGAATAATGTTGATCTTAATGACTACAAGCCTTCTATACTGCAAACCACTTTTCCTGCTGACTTTGTTTTCCAGGCTACTTCAATCTCCAGCTCTCAATCTTCTATGAATGGTACTAGCAACTTCACTGTAACCAATAGTGGATTCTTGGCAAGTTCCAGTGCTGGATTTTCAGATATGACCTTGCTTAGCAAGAATGAGTCTGTGCTGCAATTTGAGAGAGGCATGGAGGAAGCCAGCAAGTTTCTTCCTAAAGGGAACCCATTGATTATTGACCTGGAAAACAGCTCCTTTATCCCTTCTATTATGAAGGTGCCTCAGCAGGTGGAAATTAAGACGGAGAGAGATGAAAGGGAGAATTTTTCCACTGAGTCAAGAGGAAGGAAGAATCATGAGCGGGAAGATGAAACAGATTTACAAGATGAGAGAAGCAACAAGCAATCAGCTGTTTACAGGGATGACAGTGAGGAGCTATCAGAATTATTTGATAAGGTACTGCTGGGCACGGGGTGTGGTAAGGAAGACCAGCCTGATGGACCAGACATGAGCGTGCAGCAGAAAGAAGAAACAAACAAGTCTGGTGGTGGAAAGAGCCGTGTTAAGAAACAAGGCAACAAGAAGGGAGTTGTGGATCTGAGGACACTATTGATTCTATGTGCACAAGCTGTTTCTTCTGATGATCGTGCAACTGCTTATGAGTTATTAAAGCAGACAAGGCAACATTCTTCACCACTGGGTGATGGGTCTCAGAGGCTGGCCCATTGTTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGCACTGGCACTCAGATTTATACTGCTTTATCCTCCAAAAGAACCTCTGCTGCGGACATGGTGAAAGCTTACCAAATGTACATTTCAGCCTGCCCATTCAAGAAGCTTGCAATCATTTTTGCAAACCATACAATTATGAATCTAACAAAGGAAGTAGAAACTCTTCACATTGTAGATTTTGGCATCCGTTATGGCTTCCAGTGGCCTGCCCTTATTTTTCGTCTGTCAAAACGACCTGGGGGGCCTCCCAAGCTGCGCATTACAGGGATAGAGCTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGGAGACGGGGCTTCGCCTGGCAAGGTATTGTGAGCGCTTCAATGTTCCATTTGAGTTCAATGCTATTGCACAAAAATGGGAAACCATCAAATTTGAGGACTTGAAGATAAAGAAAAATGAACTTCTTGCAGTGCATTGTATGTGTCGATTTAAACATCTACTTGATGAGACAGTTGTGTTGAATAGTCCCAGGGATGCTGTTTTAAATTTAATTAGGAAGGCAAATCCTACTATCTTTATTCATACTACTGTCAATGGGAGCTACAATGCCCCATTCTTTGTGACACGGTTTCGGGAGGCTCTTTTCCATTACTCCACATTGTTTGATGTGCTTGACACCAATGTTGCTCGTGAAGATCCAATGAGGTTGATGTTTGAAAAAGAGTTCTTTGGGCGGGAGGTAATGAATATTATAGCTTGTGAAGGTTCTGAGAGGGTTGAGAGGCCTGAGACATACAAGCAATGGCAGGTTCGGAACATGAGGGCTGGATTTAGGCAACTTCCCTTGGATCAACATCTCATTAACAAATTGAGATGCAAATTGAAAGATGTGTACCACAGTGATTTCATGCTTGTTGAAGATGGCAACAGCATGCTGCAGGGTTGGAAGGGCCGAATAGTTTATGCTTCCTCTTGTTGGGTACCTGCATAG 2151 0.437 MDPHIKSNFINGIKFNQVPNTLDVEDHSFGFLDNPFLLPPDPNNAITTEEDSPLDEIDFSATVLRYINQMLMEENMEKKTCMFHDSLALQAAEKSFYEVIGETYPSSSIQNYHNVESPDGSLSSNFSVESHWNNVDLNDYKPSILQTTFPADFVFQATSISSSQSSMNGTSNFTVTNSGFLASSSAGFSDMTLLSKNESVLQFERGMEEASKFLPKGNPLIIDLENSSFIPSIMKVPQQVEIKTERDERENFSTESRGRKNHEREDETDLQDERSNKQSAVYRDDSEELSELFDKVLLGTGCGKEDQPDGPDMSVQQKEETNKSGGGKSRVKKQGNKKGVVDLRTLLILCAQAVSSDDRATAYELLKQTRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMVKAYQMYISACPFKKLAIIFANHTIMNLTKEVETLHIVDFGIRYGFQWPALIFRLSKRPGGPPKLRITGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKFEDLKIKKNELLAVHCMCRFKHLLDETVVLNSPRDAVLNLIRKANPTIFIHTTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVAREDPMRLMFEKEFFGREVMNIIACEGSERVERPETYKQWQVRNMRAGFRQLPLDQHLINKLRCKLKDVYHSDFMLVEDGNSMLQGWKGRIVYASSCWVPA. 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03867 716 MobiDBLite consensus disorder prediction 300 335 - -
Seca4g03867 716 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 306 707 IPR005202 -
Seca4g03867 716 Pfam GRAS domain family 343 713 IPR005202 -
Seca4g03867 716 ProSiteProfiles GRAS family profile. 334 714 IPR005202 -
Seca4g03867 716 MobiDBLite consensus disorder prediction 241 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03867 Seca-Chr4 68064828 68067062 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03867 63 716 GRAS Transcription Factor Family AT1G07530 57.143 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca4g03867 GRAS 5e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03867 - - gmx:100815586 1120.92