Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03864 ATGGATCCAAACTTTCCTGGAATTAGCGATTTCACAAACGGCTTCCAATTTGGTGAAGAAGGAAACATACTAGTCTCGGATCCAAATCAAAACTGGGACGTGTACCAACAATATGGGAGCCTCCTTGATGCGGACCCAGTTGGTGCGTCTGTTGCAACCTCTGTAACAGATCCTTCCTCGGAAGACAACGACTTCGCAGAAACCGCAAAATTCATAACCCAAATCCTGATGGAAGAGAACGTTGAGCAGAGGCCGTTTTATGACTCACTGACCTTGCAAGTCACAGAGAAATCATTCTACGACGCTCTCACAGACAAAGCACCTTTTTCCCCTAATCAACACCCTTTAGATATTCACAGCCCTGAACCTGATGGTGGAACCACCACCAGCAACAGCAACGAAAATTCTCCTTCTAATGGACTGATATATTTTGATCCTTCTATTACCAAAATATTGGCACAGAATATTTTCAGTGATGTTGACTCTGTATCACAATTTAGGAGAGGGTTAGAGGAAGCTAGCAGATTCCTTCCTCCTGGACCTAGGCTTGTGACTGGTTTTGAGTCAAAGGGGGAAATAGAATCATCCAACACGGTTAGGGATAATTCATTTGGGTTTAGGGGTAGAAAGAATCATGAGCGTGAAGAAAGTGATACAAATGAAATAGGTAGAAGTAACAAGCAATCAGCAATTAGTGTTGTTGATGAGAGTGACTTATCTGATATGTTTGATCGAGTGTTGCTTAATCACGATTGCTTACAGAATGAGCCAGTGAAAGCTGAGCAACCAGTTGAAAAGCCACCTTCATCTAATGGAGGAAAGGCTCGTCCTAAGAAACAAGGAAGGAAGAAGGAAACTGTAGATTTGAGGGCTCTTCTGCTTCTATGTTCACAAGCTGTGTATACCAGTGACAATAGGACTGCTAATGAACTACTAAAGCAGATTAGGCAACATTCTTCTGAGTCTGGGGATGCATCACAGAGATTGGCTCATTACTTTGCAAATGGCCTTCAGGCACGCTTGCTTGGTGATGGTACTGTTGCACAGATATTTTATTCCTCTCCAAGCTCCAAGAGGATCAGTGCTGCTGATTTTTTGAAAGCTTACAAGGTTTTCCTATCTACTAGCCCATTCAAGAAGTTTTCATATTTCTTTGCTAATAAAATGATCATGAAAGCAGCTAAAAAGGCAGGAACACTTCATATTATCGATTTTGGTATCCTATATGGTTTCCAATGGCCAATACTTATTAAGTTTCTGTCAGATAGAGATGGTGGACCTCCCAAGCTGAGGATCACAGGGATAGATTTTCCTCAACCTGGATTTCGTCCTACAGAAAGAATTGAGGAGACTGGTCGTCGTTTGGCTAATTATTGCAAGCGTTTCAACATTCCCTTTGAGTACAATGCCATAGCCTCAAGGAACTGGGAAACCATTCAAGTTGAAGACCTTAAAATTGAGAGCAATGAGGTAGTTGCTGTGAACTGTTTGATGAGGTTCAAGAATTTATTGGATGAGACAATTGAAGTGAACAGTCCTAGAAATGCAGTTCTGCATTTGATCAGGAAGATAAATCCGGATATTTTTACTCAGTCCATTGTTAATGGATCTTATAATGCCCCTTTCTTTGTCACACGGTTTAGGGAGGCTATGTTCTATTTTTCTGCTTTCTATGATATGTGTGACACTGTCATACCCCGTGAAAACGAATGGAGGATGATGATTGAGAGAGAGATTGTGGGTAGGGAGGCTATGAATGTTATAGCATGTGAAGGTTATGAGAGGGTTGAGAGGCCTGAGACATACAAACAGTGGCAGGTTAGAAATACGAGGGCTGGGTTCAAGCAGTTGCCATTGAATGAAGAATTGATGACCAAATTTAGGACTAAGTTAAGGCAATGGTACCACAGAGATTTTGTCTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGTATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATAA 2001 0.4173 MDPNFPGISDFTNGFQFGEEGNILVSDPNQNWDVYQQYGSLLDADPVGASVATSVTDPSSEDNDFAETAKFITQILMEENVEQRPFYDSLTLQVTEKSFYDALTDKAPFSPNQHPLDIHSPEPDGGTTTSNSNENSPSNGLIYFDPSITKILAQNIFSDVDSVSQFRRGLEEASRFLPPGPRLVTGFESKGEIESSNTVRDNSFGFRGRKNHEREESDTNEIGRSNKQSAISVVDESDLSDMFDRVLLNHDCLQNEPVKAEQPVEKPPSSNGGKARPKKQGRKKETVDLRALLLLCSQAVYTSDNRTANELLKQIRQHSSESGDASQRLAHYFANGLQARLLGDGTVAQIFYSSPSSKRISAADFLKAYKVFLSTSPFKKFSYFFANKMIMKAAKKAGTLHIIDFGILYGFQWPILIKFLSDRDGGPPKLRITGIDFPQPGFRPTERIEETGRRLANYCKRFNIPFEYNAIASRNWETIQVEDLKIESNEVVAVNCLMRFKNLLDETIEVNSPRNAVLHLIRKINPDIFTQSIVNGSYNAPFFVTRFREAMFYFSAFYDMCDTVIPRENEWRMMIEREIVGREAMNVIACEGYERVERPETYKQWQVRNTRAGFKQLPLNEELMTKFRTKLRQWYHRDFVFDEDNNWMLQGWKGRILYASTCWVPA. 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03864 666 MobiDBLite consensus disorder prediction 123 140 - -
Seca4g03864 666 MobiDBLite consensus disorder prediction 193 231 - -
Seca4g03864 666 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 659 IPR005202 -
Seca4g03864 666 ProSiteProfiles GRAS family profile. 280 664 IPR005202 -
Seca4g03864 666 MobiDBLite consensus disorder prediction 205 222 - -
Seca4g03864 666 Pfam GRAS domain family 289 663 IPR005202 -
Seca4g03864 666 MobiDBLite consensus disorder prediction 256 284 - -
Seca4g03864 666 MobiDBLite consensus disorder prediction 110 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03864 Seca-Chr4 68031500 68033599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03864 70 666 GRAS Transcription Factor Family AT1G07530 48.105 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca4g03864 GRAS 1.8e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03864 - - lja:Lj0g3v0300259.1 890.952