Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03794 ATGGCAGAGGAAGTTAAGCTTTTAGGCACATGGACTAACCCTTTCTCTTGCGGAGTTGAGTTAGCGCTGAAATTGAAAGGGGTTAAATATGAATTCATTGAAGAAGTCCTTGATAATAAGAGTCCACTGCTTCTCGGGTACAACCCAGACTATAAGAATAAGGTTCCTGTGCTTGTCCACAATGGGAAGCCTATAGCAGGGTTTCTTTTTATTCTTGACTATGTTGATGAGAGTTGGGATCACCATCCCCTGTTGCCTTCTGATCCTTATGGTAGAGCCAAGTCACGCTTTTGGGCTAAATCCATTTATGAAAAGGTGAATTGGGTACTCAAATCTTCTCAGTTGTTTTCAATTGGAGCGAAGGCCTTGTTTGGTAAAGGCACTAGAATGGAAGATGGCAAGATAGCATTTGATGAATTTGTGAAATTGCTGGAGAATGAGCTGGAGGGAAAGGACTTTTTTGGAGGTGACACCATTGGATACTTGGACATTGCTGCAATAATAATACCAATCTTGTTTGGAAGGGTCCAAGAAGTTTTAGGAATGGAGTTGGTGTCCCAAGACAAATTTCCCAACATTTTCAAATGGATTGAAAAGCTTAACAAAACTGATGTCTTCAACCAAACCTACCCTTCAAAAGACATACACATGACTTACATAAGGGCTCGCCATGAAGCCAATCAGGCTTCCAAATAG 696 0.4109 MAEEVKLLGTWTNPFSCGVELALKLKGVKYEFIEEVLDNKSPLLLGYNPDYKNKVPVLVHNGKPIAGFLFILDYVDESWDHHPLLPSDPYGRAKSRFWAKSIYEKVNWVLKSSQLFSIGAKALFGKGTRMEDGKIAFDEFVKLLENELEGKDFFGGDTIGYLDIAAIIIPILFGRVQEVLGMELVSQDKFPNIFKWIEKLNKTDVFNQTYPSKDIHMTYIRARHEANQASK. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03794 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 209 IPR045073 -
Seca4g03794 231 SUPERFAMILY GST C-terminal domain-like 77 224 IPR036282 -
Seca4g03794 231 CDD GST_C_Tau 89 223 IPR045074 GO:0004364|GO:0006749
Seca4g03794 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Seca4g03794 231 SFLD Main (cytGST) 2 229 - -
Seca4g03794 231 SUPERFAMILY Thioredoxin-like 5 102 IPR036249 -
Seca4g03794 231 Gene3D - 85 231 - -
Seca4g03794 231 SFLD Main.3: Omega- and Tau-like 2 229 IPR045073 -
Seca4g03794 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Seca4g03794 231 CDD GST_N_Tau 5 79 - -
Seca4g03794 231 Gene3D Glutaredoxin 1 84 - -
Seca4g03794 231 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Seca4g03794 231 Pfam Glutathione S-transferase, C-terminal domain 139 202 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03794 Seca-Chr4 66985384 66986144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03794 2 225 Glutathione S-transferase Gene Family AT2G29420 44.444 1.40e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03794 K00799 - pvy:116145023 237.269