Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03791 ATGGAAGGAATGGCACCACCGCCGTCTTCTAATGGCGCCATGACGACGGTTCATAAGAAGATGACGCACATGACCTTCTTCTGGGGAAAGGAAGCAGAGATTCTGTTCGAGAATTGGCCTGGGGACAGAGGTAACATGTACGCCTTGGCCTTGATCTTTGTGTTCGTTTTGACAGTTGTCGTCGAATTGCTCTCCCGCACCAGGTTTATCAAACCCGGCACGAACCATGTGGTGGCTGGTTTGATTCAGACCCTGTTGCACCTCCTCAGGGTTGGGCTGTCTTACTTAGCCATGCTTGCTGTCATGTCTTTCAATGGGGGAGTGCTCTTGGTTGCTGTGTTCGGTCATGCTCTTGGATTTTTCTTAAGTAGCAGGGTTTTTCAAAAACCGCACTACGATGAGGGTTATGATCTTCCTCCAATGTCTTGTTGTTAA 435 0.4897 MEGMAPPPSSNGAMTTVHKKMTHMTFFWGKEAEILFENWPGDRGNMYALALIFVFVLTVVVELLSRTRFIKPGTNHVVAGLIQTLLHLLRVGLSYLAMLAVMSFNGGVLLVAVFGHALGFFLSSRVFQKPHYDEGYDLPPMSCC. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03791 144 Pfam Ctr copper transporter family 24 66 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g03791 144 Pfam Ctr copper transporter family 76 122 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g03791 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 16 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03791 Seca-Chr4 66761020 66761454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03791 25 144 Inorganic Solute Cotransporters AT5G59030 50.806 1.69e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03791 K14686 - gmx:100306175 201.83