Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03790 ATGGATGGGATGGGCATGGCACCAACAAAGCCATCTACTAATGGCACCATGATGATGGGCCATAAAATGCACGGCATGATGCACATGACCTTCTTCTGGGGGAAGGATGCCTTGATTCTGTTCGACAATTGGCCTGCGGGTAAAGATAACATGTATGCCTTGGCCTTGGTCTTTGTGTTTGTGATGTCTGTTCTCATCGAGCTGCTCTCTCACACCCGGTTCATCAAACCCGGTTCGAACCATGTCGCGGCCGGTCTGGTTCAGACCCTGCTGCACCTCCTTAGGGTTGGGCTTTCATACTTGGTCATGCTGGCACTCATGTCTTTCAATGGGGGAGTTTTCTTGGTTGCTGTGTTTGGTCATGCTCTTGGGTTCTTTTGTAGCAGGGCTTTCAATAAACAGCACAAGGATGAGGGTTTTGATCTTCCTCCAATGTCTTGTTAA 444 0.491 MDGMGMAPTKPSTNGTMMMGHKMHGMMHMTFFWGKDALILFDNWPAGKDNMYALALVFVFVMSVLIELLSHTRFIKPGSNHVAAGLVQTLLHLLRVGLSYLVMLALMSFNGGVFLVAVFGHALGFFCSRAFNKQHKDEGFDLPPMSC. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03790 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g03790 147 Pfam Ctr copper transporter family 81 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g03790 147 Pfam Ctr copper transporter family 29 73 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03790 Seca-Chr4 66734246 66734689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03790 30 147 Inorganic Solute Cotransporters AT5G59030 50.000 6.70e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03790 K14686 - gmx:100306175 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03790 4 66734246 66734689 Seca4g03790 4 66734246 66734689 ECH