Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03782 ATGGCTTCCATAGCACTCACCACCGCCACCCTCCCATCTCTCCGCCTCCGCTCTTCCCCTAAATCTTCACCACTTCGCCATTCCACCACTTTCAAATTCAAACCCCTCAAACTCAACAGCAACCCTTCCATTTCTTCCTTCCCTTCCTTCCCACTTTCCACACTCACCTCAAATCGGAAATCTCCCACTCTCACTGTTAGAGCCTCGGCAGCTTCAGCTTCACCCCCAGCCCCTATTACTCCGGCTCCGGTTCAGCCATGGCAGGGCGCAGCCATAAAACCCCTATTAGCTTCCATAGCGATTGGGGTTCTACTCTGGTTCGCTCCCGTTCCCGAGGGTGTCTCCCGAAACGCATGGCAATTGCTCGCGATTTTCTTGGGCACAATCGTCGGCATTATCACCCAGCCATTGCCCCTCGGTGCCGTCGCTATATTGGGATTGGGAGTGTCTGTTCTCACGAAAACCCTAACTTTCGCGGCAGCCTTTTCGGGCTTCGGGGATCCCATTCCCTGGCTCATTTGCCTCGCCTTCTTCTTCGCCAAGGGTTTCATCAAAACCGGCCTCGGCAATCGCGTCGCTTATCAATTCGTGTCCCTTTTCGGTAGCTCTTCGTTAGGGTTAGGTTATAGCTTGGTTTTCAGCGAGGCCTTGTTGGCACCGGCAATTCCTTCGGTTTCCGCCAGAGCTGGTGGGATTTTTCTTCCGTTGGTTAAGTCTCTGTGTGTAGCTTGTGGTAGTAACGCTGGCGATGGAACGGAGAACAGGCTGGGGTCGTGGTTGATGCTGACTTGCTTTCAGACTTCTGTGATTTCGTCGGCGATGTTTCTGACTGCAATGGCGGCGAATCCATTGTGCGCCACTCTCACTCTGAACTCCATTAACCAGACACTTGGGTGGTTGGACTGGGCCAAAGCTGCGATCGTGCCCGGGTTGGCATCGTTGGTGTTGGTGCCCTTGATCTTGTATGTCATCTACCCTCCTACCCTAAAATCCAGTCCAGACGCACCCAAGCTTGCTAGGGAGAAGTTGCAGAAGATGGGGGCCATGTCAACCAACGAGAAGATCATGACTGTCACTCTGCTTCTTACGGTAGTGGGGCTTTGGGTTTTTGGTGGGGCTCTTAATATAGATGCTGTAAGTGCTGCCATTCTTGGATTAGCAGTACTCCTTGTCACAGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCCTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCCTTTGGGATTCTGGTCCTTCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCACATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATACTTTGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGAATTGGTTCAGCTCCAGTATTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTACGGATTCCTTATTAGTATCGTTAACATTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1677 0.5086 MASIALTTATLPSLRLRSSPKSSPLRHSTTFKFKPLKLNSNPSISSFPSFPLSTLTSNRKSPTLTVRASAASASPPAPITPAPVQPWQGAAIKPLLASIAIGVLLWFAPVPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTLNSINQTLGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKSSPDAPKLAREKLQKMGAMSTNEKIMTVTLLLTVVGLWVFGGALNIDAVSAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKAIGLW. 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03782 558 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 64 558 IPR030676 -
Seca4g03782 558 CDD ArsB_NhaD_permease 129 552 - -
Seca4g03782 558 NCBIfam DASS family sodium-coupled anion symporter 109 552 IPR001898 GO:0016020|GO:0022857|GO:0055085
Seca4g03782 558 Pfam Sodium:sulfate symporter transmembrane region 94 558 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03782 Seca-Chr4 66546895 66551470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03782 1 557 Antiporters AT5G12860 79.004 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03782 - - gmx:100796365 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03782 4 66546895 66551470 Seca4g03782 4 66546895 66551470 ECH