Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03776 ATGGAGCATGATAAAAATCAATCACTTGAATTTGATGAGCCTAAAGACATTTTTCTTGGTCAAGTTGTGCATAGCCAAGATGAAGCTTATAACTTATACCAAGCACATGCCTTCAAAATGGGGTTTAGTGTAAGAAAGGGGAAGGAGTTGTATTATGATAGTGAGAAAAAGTTCATACGCTCCAAATATTATTTTTGTTCCAAAGAAGGGTTTAAAAATAATGAAGCTGAAGGTGAAATGGCTTATGAAAGAGCAAATTCAAGAACGGGTTGTAAAGCAATGGTGCGATTTAATGTGAGTAAGGAAGGAGTTTGGAAAATTACACAGTTGGTACTCAATCACAATCACGAGTTTGGAGAGGAAGTTGGTGGATTCGATAAACTTGGTTTAACAGTGAAAGATATGCAAAATTATGTCTACACTGAAAAGTTGAAATTGATTGAAGCCGAGGATGCTCAATCATTAGTGAATCTCTTGTGGAGTAGACAAGCACAAGATCCAATGTTCTACTACAGTGTACAATTAGACCAAGAGTCACGCCTCACAAATGTGTTCTGGAGAGATGGCAAATCGAAAGTTGATTATGATTGCTTTGGGGATGTTGTGGTTTTTGATACCACTTATCGTACTAATAAATACAACTTGATTTGTGCCCCTTTTGTTGGTGTAAATCATCATTGGCAAAATGTCATGTTTGGTTGTGCTCTGTTGTTTGATGAAACTGCAGTTTCTTTTAATTGGTTGTTTAAAGTGTTTTTGGAGAGTATGGGAAACCAACATCCAAAAACAATTTTTACAGATCAAGATGCATCCATGGCCAAAGCAATCGGACAGGTAATGCCAAATACATGTCATTGGTTATGCTTGTGGCATATAGCAAAAAATGCTCCTTCTTATTTGGGTGCTCTCAATTCTGACTCTAAGTTTCAAAGCCTATTCCAAAGATGCATGACAAGTTGCAATTCAGAAGAAGAGTTTGAAAGCACTTGGCAAAAGATGATGAATGAGTACAAGCTTCATGATCATGTTTGGTTGAGCAATATGTACAAAATTCGTCACAAGTGGAGCACTGCTTTTAGCAAGGATGTATTTTCTGCTGATATCAAGTCCTCTCAAAGGAGTGAAAGTACAAATAGTGCATTGGGTGAAATTGTAGGTAAAACAACTAGTCTCGCACAATTCTTATTGTCATTTGAGAAGATGGTAAAAAAGTGGCGGCAACTAGAAGTTGAGAAGGAATTCAAAAATAGCCAAAGTGAGCCTCCTCGCATTATTAATATTAGTGAGACTTTACGACATGCATCTACAATTTATACTTATAAGATTTTCAAACTTTTTTTGAAAGAGTATCTTGAGGGAACATGGGGAAGCACTTCCATAGAGATTGATGGGTATGATAATGTCTCAAATCATGAAGTCATTTTAAATCACATGCCTCAAAAGAAGCATATTGTGTCATTTGACTCTTCCACTACCATGATCAATTGTAGCTGTCACAAGTTTGATTCCATGGGCATTCTTTGTAGTCATGCTTTGCGAATTTACAACATCAAAGGTGTTTTGAGAATACCCAACCAATACTTTTTGAAAAGATGGTCAAAGAATGCAAGGTCCAAGATTTATGAACACGTGAATGGGGCCTTGGAAGAAGTCTCTACCTCTAACATGAATTCAATGACCAATGATGATGATGCTAGTCTTCTTTATCGTAATGCTATTATGAAGTCATTCTATAATCTAGTTTTGGAAACTCAAGAACACAAAGAAGCTCAAAAAATTATGTGGAATTTACTTGAGATTGGAGTTGAGCGTGTGCAACAATGTCTTAGCAAGGTCAACTTAAATCCAAATGCAGCAACCAATGACAGATGTTTCAATCAAAATGAGGAGAATCACCATTCTCAAATCCAAAATCCTCCTCTTGCCAAGACAAAGGGAATGTCTAGTACACGCAAGAAAGGACATTTTGAGAAAAGGAAACGAACGGCCACGAAGGTGAAGAAAAATAAAGGTGAGGGATTTGATACTTTTCTTGATGGCACATTTTGGAGTTGTATAAGGATATATCTGATACATTCTCTTGTTTTTGTTTTTTATACAGAGAAACAAAAAGAAGGAGAGTTTTCTGATACTTATCAAAGAATGGAGGACCAATCTAATGTTCAAACATGGATGGATGAAACTTTTAATGTTACTTATGCTTCTTTGGAAGAACCTTTACAGGTTTTCTATATGTTGTAA 2241 0.361 MEHDKNQSLEFDEPKDIFLGQVVHSQDEAYNLYQAHAFKMGFSVRKGKELYYDSEKKFIRSKYYFCSKEGFKNNEAEGEMAYERANSRTGCKAMVRFNVSKEGVWKITQLVLNHNHEFGEEVGGFDKLGLTVKDMQNYVYTEKLKLIEAEDAQSLVNLLWSRQAQDPMFYYSVQLDQESRLTNVFWRDGKSKVDYDCFGDVVVFDTTYRTNKYNLICAPFVGVNHHWQNVMFGCALLFDETAVSFNWLFKVFLESMGNQHPKTIFTDQDASMAKAIGQVMPNTCHWLCLWHIAKNAPSYLGALNSDSKFQSLFQRCMTSCNSEEEFESTWQKMMNEYKLHDHVWLSNMYKIRHKWSTAFSKDVFSADIKSSQRSESTNSALGEIVGKTTSLAQFLLSFEKMVKKWRQLEVEKEFKNSQSEPPRIINISETLRHASTIYTYKIFKLFLKEYLEGTWGSTSIEIDGYDNVSNHEVILNHMPQKKHIVSFDSSTTMINCSCHKFDSMGILCSHALRIYNIKGVLRIPNQYFLKRWSKNARSKIYEHVNGALEEVSTSNMNSMTNDDDASLLYRNAIMKSFYNLVLETQEHKEAQKIMWNLLEIGVERVQQCLSKVNLNPNAATNDRCFNQNEENHHSQIQNPPLAKTKGMSSTRKKGHFEKRKRTATKVKKNKGEGFDTFLDGTFWSCIRIYLIHSLVFVFYTEKQKEGEFSDTYQRMEDQSNVQTWMDETFNVTYASLEEPLQVFYML. 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03776 746 MobiDBLite consensus disorder prediction 629 662 - -
Seca4g03776 746 Pfam SWIM zinc finger 490 514 IPR007527 GO:0008270
Seca4g03776 746 MobiDBLite consensus disorder prediction 648 662 - -
Seca4g03776 746 Pfam FAR1 DNA-binding domain 32 118 IPR004330 -
Seca4g03776 746 ProSiteProfiles Zinc finger SWIM-type profile. 481 519 IPR007527 GO:0008270
Seca4g03776 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 606 IPR031052 GO:0006355
Seca4g03776 746 MobiDBLite consensus disorder prediction 629 645 - -
Seca4g03776 746 SMART 26again6 494 521 IPR006564 GO:0008270
Seca4g03776 746 Pfam MULE transposase domain 201 295 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03776 Seca-Chr4 66380535 66382895 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g03776 MULE 2.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03776 - - tpra:123905334 1005.36