Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03773 ATGGAGGAGGCAATAGGTTCTTTCGAGAGACACCTAAACAACATGAGGGATTATTTTGGGACTGGGAAGACAAAGGAAGCCTCTTGGAGACTATCACAGCTCAAAGGGTTGCGTTGTTTCCTCATCCAAAAAGAGGAAGATATCTTAAAGGCCCTCATGCATGATTTAGGGAAACATCAGGTTGAAGCTTTTAGAGATGAGATAGGAACATTGATGAAGTCCTTAAATCTCTCATTGAAGTGTTTGAAAGAGTGGATGTCTGGCAAAAAGGCTAAATTGCCACAAATAGCACTGCTTACAAGTGCAGAAATTGTTCCCGAGCCTTTGGGTCTCGTTCTCATTATCTCATCTTGGAATTTCCCCTTTGGAGTGTCCCTAGAGCCACTAATAGGAGCAGTAGCTGCCGGAAACGCAATAGTCTTAAAGCCTTCAGAATTGTCTCCTGCAAGTTCTTCTCTAATTGCCTCTACTCTTCCCACTTACTTGGACAATGAAGCCATTAAAGTTATAGAAGGTGGACCAGAGGTGTCACAGCAGCTGCTACAACAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCACGTGTGGGGCGGATTGTGATGTCTGCAGCAGTGAAGCATCTGACTCCTGTCACTCTGGAATTGGGTGGAAAATGCCCTGCTGTTGTTGACTCTCTTTCATCTTCTTGGGACATAGAGGTGGCTGTGAAGCGGATCATTGTGGGGAAATATGGGACTTGTGCTGGTCAAGCATGTGTTGCAATCGATTATGTCCTTGTGGAAACTGGATACTGTTCAAAACTGGTGGAAATGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCAAAGCATTCCAAGACTATAGCGAGGATAGTTAATAAACAACACTTTTTTAGATTGAACAATCTTCTTGCTTGCCAAAACGTCAAAGAATCTGTGGTTTATGGTGGCTCAATGGACGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGAATCCCCCACTTGATGCATCAATCATGTCAGACGAAATTTTTGGCCCATTGCTTCCAATTATTACTGTGGAGAAGATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTTACCAAAAACCAAACACTGCAGAAAAGAATGATCTATGACACATCATCTGGCAGTGTGATTTTCAATGATGCGATTCTCCAAGTAGTACCCTATCTAGTATCTACTGCTAATTGTTTTGTATACTTCAATTTGCACATACCAATTGTTCATGTTAATATAAATTACTGTATATGTTTGTTGTGTGTAGAATGCAGTGGATTCTCTCCCATTTGGAGGAGTGGGTGA 1362 0.4156 MEEAIGSFERHLNNMRDYFGTGKTKEASWRLSQLKGLRCFLIQKEEDILKALMHDLGKHQVEAFRDEIGTLMKSLNLSLKCLKEWMSGKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPFGVSLEPLIGAVAAGNAIVLKPSELSPASSSLIASTLPTYLDNEAIKVIEGGPEVSQQLLQQRWDKIFFTGSARVGRIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWDIEVAVKRIIVGKYGTCAGQACVAIDYVLVETGYCSKLVEMMKVWIKKMFGDNPKHSKTIARIVNKQHFFRLNNLLACQNVKESVVYGGSMDEENLFIEPTILVNPPLDASIMSDEIFGPLLPIITVEKIEDSIEFISSRPKPLALYVFTKNQTLQKRMIYDTSSGSVIFNDAILQVVPYLVSTANCFVYFNLHIPIVHVNINYCICLLCVECSGFSPIWRSG. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03773 453 PANTHER ALDEHYDE DEHYDROGENASE 7 408 IPR012394 GO:0006081
Seca4g03773 453 SUPERFAMILY ALDH-like 11 408 IPR016161 GO:0016491
Seca4g03773 453 PIRSF ALDH 2 415 IPR012394 GO:0006081
Seca4g03773 453 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 407 IPR016163 GO:0016620
Seca4g03773 453 FunFam Aldehyde dehydrogenase 217 414 - -
Seca4g03773 453 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 216 IPR016162 GO:0016491
Seca4g03773 453 Pfam Aldehyde dehydrogenase family 13 404 IPR015590 GO:0016491
Seca4g03773 453 FunFam Aldehyde dehydrogenase 16 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03773 Seca-Chr4 66347266 66350342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03773 1 406 Aldehyde Dehydrogenase Gene Family AT4G36250 51.724 2.27e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03773 K00128 - gmx:100817701 663.685