Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03748 ATGTCCTCATCCAACATTTCTGGCCACCTCACCCTTACCGATTTCGATCTCTCTCGCAAACTCACCCCAAAAACCACCAAAACCGTTGCTCCTTCTCCAATGCCTTTGCCTCTTCCTGATTCCAAGCCTCCAGAGCCTCGCCGCAAACACCACCGCCGGAATTTTTCTCGTTGGATCCCCCTCCTCCCGCCGGACAACAGTCATCAAAACAAAAACGGGCTTAAGAAGGCCAAGTCCGCCCGAGTCAGCCCGGTGAGTCGACGGAAGCCGAGTTTCTCCAACAACGGCGAACGCTCCAACTCCTTCGTCGGCACCGAGGAGTACGTCTCGCCGGAGGTCGTACGCGGCGACGGCCATGAGTTCGCCGTCGATTGGTGGGCCCTGGGGATACTCGCGTACGAAATGCTGTACGGTAAGACGCCGTTCAAGGGGAAGAACAGGAAGGAAACGTTCCGAAATGTGCTGACGAAACCGCCGGAATTCGTCGGAAAACGGTCGGCGTTGACGGACCTGATTGAGAAATTGTTGGAGAAGGACCCTACGAAGCGATTGGGTTATGCGCGAGGCGCTGTGGAGATTAAGGAGCATGAGTTCTTCAGAGGGATGCATTGGGACATGTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGTCGAGAGATGACGGCGCCAGGGAATCGCCGGAGAAATTGCCCGCGGGGAATGGCGGCGTGGATATTAGGGATTACTTCCAGAGCTTGAAACCGGCGCCGTCGTTGCCGCCTTCGCCGTTACCGTCACCATCGTGTAAATTTAGGAGCAGGAGCAATGTTTCTCTAACAGAATTCTAA 828 0.5592 MSSSNISGHLTLTDFDLSRKLTPKTTKTVAPSPMPLPLPDSKPPEPRRKHHRRNFSRWIPLLPPDNSHQNKNGLKKAKSARVSPVSRRKPSFSNNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGKTPFKGKNRKETFRNVLTKPPEFVGKRSALTDLIEKLLEKDPTKRLGYARGAVEIKEHEFFRGMHWDMLTEVVRPPFIPSRDDGARESPEKLPAGNGGVDIRDYFQSLKPAPSLPPSPLPSPSCKFRSRSNVSLTEF. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03748 275 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03748 275 PANTHER FLIPPASE KINASE 1-RELATED 7 220 - -
Seca4g03748 275 MobiDBLite consensus disorder prediction 86 103 - -
Seca4g03748 275 FunFam Serine/threonine-protein kinase OXI1 97 218 - -
Seca4g03748 275 SUPERFAMILY Protein kinase-like (PK-like) 7 238 IPR011009 -
Seca4g03748 275 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03748 275 MobiDBLite consensus disorder prediction 1 29 - -
Seca4g03748 275 MobiDBLite consensus disorder prediction 217 275 - -
Seca4g03748 275 Gene3D Transferase(Phosphotransferase) domain 1 95 218 - -
Seca4g03748 275 MobiDBLite consensus disorder prediction 1 103 - -
Seca4g03748 275 MobiDBLite consensus disorder prediction 261 275 - -
Seca4g03748 275 Pfam Protein kinase domain 94 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03748 Seca-Chr4 65698473 65699300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03748 7 260 AGC Kinase Gene Family AT3G20830 60.392 5.51e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca4g03748 Pkinase 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03748 - K08286 gmx:100785281 395.586