Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03684 ATGGGTGAGGAGTGTGGCACAGCTGATGAAAACAGAACAGGAGGAAGTTCTGCTGAGCCAACTCCCAAACAAGATCAAGATGATAATGTGACTCAAGATTCTTCTGGAGGGGCAACAATACCATCGGCAATTCCCACTGTATCAGTTGTTTCTGTTGATGAGCCCTATGTGGGTCAGGAGTTTGAGACAGAAGCAACAGCACAAGCATTTTATAATGCATATGCCACAAATGTTGGATTCATCATACGTGCAAGTAAACTCTCACGATCAAGGCGTGATGGATCTGTTATAGGACGGACTCTTGTTTGCAACAAAGAGGGTTACAGAATGACTGGCAAGCGTGAAAAGGTTGTAAGGCAAAGGGCAGAGACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTGAATTCTGGTAAATGGGTTGTTACGAAGTTTGTAAAGGAGCACACACATCCTCTAACTCCTATGGGAGGTAGAAGGGACTTCATTTATGAACAATGTCCGTTTCAGAGTGAACAAGATAAAATTCGGGAACTATCTCAGCAGTTGGCAATAGAGAAAAAGCGATCTGCAACTTATAAAAGACATCTTGAATTGATATTTGGTTACATCGATGAGCACAATGAGAGCCTTTCAAAGAAAATACAGCACATAGTAGATAGTGTGAAGGAGATGGAAACCAACGAACAACATAGTCAATGA 708 0.4237 MGEECGTADENRTGGSSAEPTPKQDQDDNVTQDSSGGATIPSAIPTVSVVSVDEPYVGQEFETEATAQAFYNAYATNVGFIIRASKLSRSRRDGSVIGRTLVCNKEGYRMTGKREKVVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLTPMGGRRDFIYEQCPFQSEQDKIRELSQQLAIEKKRSATYKRHLELIFGYIDEHNESLSKKIQHIVDSVKEMETNEQHSQ. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03684 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 230 - -
Seca4g03684 235 MobiDBLite consensus disorder prediction 1 42 - -
Seca4g03684 235 Coils Coil 171 191 - -
Seca4g03684 235 MobiDBLite consensus disorder prediction 10 42 - -
Seca4g03684 235 Pfam FAR1 DNA-binding domain 70 156 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03684 Seca-Chr4 64149685 64151230 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g03684 FAR1 7.1e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03684 - - gmx:100777092 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03684 4 64149685 64151230 Seca4g03684 4 64149685 64151230 ECH