Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03672 ATGGATAACAACAAACCCTTTTACATAACTTCAACACCAACCCTTGATATGAAATCAAAACAACCACCACCACCACCAACATCATCATCATCGTTGTCTACGTCATCACTACATCCTCCACCACCGATTCTGGATTCTGCCCCACGTGCTCAGTCTGAGATTCTCACCCTCCCGGATAATATCAACATCGATGCTGATCTAAACACCATAGGTGACCTCTCATTCTCTGATGGCACCACCGAGGAAGACTTGTTTCCCGCCTACCTCGATGTGGATAATATCAACCCATCCTCTCAAGCCCCTGGTTGTGCTAACAACATAGATATTGCTATCGGTACTACCGATACCAATGAAAGTCTCAAGGTTGGGCACGAACGTAGTTTGTCCATGAATGGTTCAACATCTATCATCAAACTGAACATGTTGTTCTCTTCTTCTCTAAATGACTCTACAATTAACTCAAGAAAAGGAATGTCTGCTTTGAAACTTGAGGAGCTTGCCTTGGTTGATTCCAAGCGTGCTAAAAGACAATCTGCAATGAGATCAAGGGCAAGGAAGGCGCGCTATATTTTTGAGCTTGAAAAGAGAGTGCAAACATTGAAAACTGAAGCAACATCCATATCTACAAAATTAACTATCGTGAAGGGGAACGTACAAAGACTTTCTGCTAAGAATAATGAGTTGGGGTTACAGATTTCAAGCATGCAACAACATTTTCAATTGCAACGTGCATTCAACAATGCAGTAAAAGAGGAAATTCAACATCTAAAAGTAATGACTGGAGAAGCTATAATGGGTGGAGGACCTATGAACTTTGCTGCATTTGGAAGGGGACAACAATACTATCCCTACAATCAGGCAATGCATGCTCTTTTCGCTGAACGACATTTACAACAACTTCAAAATCATTCCCAAAGGCTAAAGCAGAAACTTCGGCAGTATGAACTACAGAAGCAACAGCAACAACAACAACCACAACCACAACCACAACCACAACAAGAGGAGGGGGAAGAGCAACATTAA 1023 0.4194 MDNNKPFYITSTPTLDMKSKQPPPPPTSSSSLSTSSLHPPPPILDSAPRAQSEILTLPDNINIDADLNTIGDLSFSDGTTEEDLFPAYLDVDNINPSSQAPGCANNIDIAIGTTDTNESLKVGHERSLSMNGSTSIIKLNMLFSSSLNDSTINSRKGMSALKLEELALVDSKRAKRQSAMRSRARKARYIFELEKRVQTLKTEATSISTKLTIVKGNVQRLSAKNNELGLQISSMQQHFQLQRAFNNAVKEEIQHLKVMTGEAIMGGGPMNFAAFGRGQQYYPYNQAMHALFAERHLQQLQNHSQRLKQKLRQYELQKQQQQQQPQPQPQPQQEEGEEQH. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03672 340 SMART brlzneu 163 227 IPR004827 GO:0003700|GO:0006355
Seca4g03672 340 MobiDBLite consensus disorder prediction 1 47 - -
Seca4g03672 340 Pfam bZIP transcription factor 176 225 IPR004827 GO:0003700|GO:0006355
Seca4g03672 340 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g03672 340 MobiDBLite consensus disorder prediction 303 340 - -
Seca4g03672 340 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 336 - -
Seca4g03672 340 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
Seca4g03672 340 CDD bZIP_plant_RF2 169 212 IPR044759 GO:0003700|GO:0006355
Seca4g03672 340 Gene3D - 171 221 - -
Seca4g03672 340 Coils Coil 290 324 - -
Seca4g03672 340 MobiDBLite consensus disorder prediction 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03672 Seca-Chr4 63481893 63484091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03672 18 304 bZIP Transcription Factor Family AT2G31370 42.059 2.55e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca4g03672 bZIP_1 1.3e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03672 - - jre:109005463 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03672 4 63481893 63484091 Seca4g03672 4 63481893 63484091 ECH
Seca4g03672 4 63481893 63484091 Seca4g08896 4 212180165 212184731 PCT