Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03646 ATGCCTCCCATGGCTTCTTCGATGCTTCTTCCCCTTTGTTCTACTTGTGGTAAAACTCCGTCTTTTACTCCTCCTAGAGGCATTTCTGTTGACAAACTTCGAAGATTAGTTCTTAATGTCAAGTCCTCAGAGAAAACGGAATATACTGCTATGTTTAATACCAATTCACGCAGAGACTTTCTTGGGTTAGCTTTAGGAGTCTCAGGCCTCTTCATCCATTCATTGGATGCAGCCTATGGAGCTGGTTTGCCCCCCGAGGAAAAGCCAAAATTATGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAGGTTGGACAAGGCCCTAGTCCACCAGTTGGATTTCAGGTCGCCGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGCTTTACATTTTTCGAGTTGGTTCTGGTCAGGTGATAAAAGGTCTTGATGAAGGTATTCTGAGCATGAAAGTAGGAGGGAAGCGTCGACTATATATTCCTGGATCAGTAAGCTTTTATCTTGATAAATGA 588 0.415 MPPMASSMLLPLCSTCGKTPSFTPPRGISVDKLRRLVLNVKSSEKTEYTAMFNTNSRRDFLGLALGVSGLFIHSLDAAYGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGILSMKVGGKRRLYIPGSVSFYLDK. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03646 195 Gene3D - 86 193 IPR046357 GO:0003755
Seca4g03646 195 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 128 195 IPR001179 GO:0003755
Seca4g03646 195 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 127 191 IPR001179 GO:0003755
Seca4g03646 195 SUPERFAMILY FKBP-like 41 188 - -
Seca4g03646 195 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 78 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03646 Seca-Chr4 63039390 63043227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03646 109 191 Calmodulin-binding Proteins AT3G25230 36.905 4.88e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03646 K01802 - gmx:100818743 319.701