Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03619 ATGGCTTCTTCACAAACTTCCTCCAACAATCTCCCTCTCAAACCAATCCCTGGAAGCTACGGCCTTCCCTTCTTCGGACCCTTAAGCGACAGACATGACTACTTCTACAACCAAGGACGAGACGAATACTTCGCCACAAGGATCCAAAAGTACAACTCCACCGTCATCAGAACCAACATGCCACCTGGCCCCTTCATCTCCTCCAACCCTAAAGTCATCGCTCTCCTTGACGCTATCTCCTTCCCCATCCTCTTCGACAACTCCAAAGTCGAAAAACGCGACGTCCTTGACGGTACCTTCATGCCTTCCACTTCCTACACCGGCGGCTACCGCACCTGCGCCTTCCAAGACACCACAGAACCCTCTCATAACCTCCTCAAGAGCTTCTACCTCAAACTCCTCGCTTCTAAACACCACACCTTCTTCCCTCTCTTCCGCAACAACCTCTCCGATCACTTCACCGACCTGGAAGACCAGCTCGCCGGGAAATCAGGCAAGGCTAGCTTCAACACCTCCATCGGCACCGCCACGTTTAACTTCCTCTTCCGCCTCCTAACTGAAAAGGACCCCTCGGAGACCAAGATCGGGTCCAAAGGCCCCAGCCTCGTGGAGACGTGGCTCGCCGCTCAGCTTGCTCCACTCGCTACACTCGGTTTGCCTAAGATATTCAACTACGTCGAAGATTTGTTGATCAGAACGATTCCTTTCCCGGCGTGGACCGTGAAGTCGAGTTACAAGAAGCTTCACGAAGGTTTCTCGGAGGCAGGTACGGCGGTGCTGGACGAAGCAGAACGGGCGGGGATCAAGAGAGACGAGGCTTGCCACAATCTCGTCTTCATGTTAGGGTTCAACGCCTACGGTGGGTTAACGAACCAGTTCCCGATCCTAATCAAGTGGCTCGGATTGGCTGGTGAGGTTTTGCACAAACAGCTGGCTGGTGAGATCAGGACCGTTGTTAAGGAAGAAGGCGGGGTGACAGTGGGGGCGTTGGATAAGATGACTTTGACTAAATCAGTGGTTTATGAGGCTCTCAGAATAGAGCCTGCTGTGCCGTACCAGTACGCCAAGGCGAGGGAGGATCTGGTGGTGGAAAGCCACGATGCTGCTTTTGAGATCAAGAAAGGTGAAATGCTCTTTGGATATCAACCGTTCGCTACGAAGGATCCAAAGGTGTTTGAGAATCCAGAGGAGTTTGTGGGCCATAGGTTCGTGGGAGATGGAGAGAAGCTGTTGAAATACGTGTACTGGTCTAACGGGCGTGAGACGGAGCATCCCACAGCGGATAATAAACAGTGTCCAGCTAGGGATCTGGTGGTGCTCATGTGCAGGTTATACTTGGTGGAATTCTTCTTGCGCTATGATACCTTCACCTTCGAGTTTAAACCGGTTGTTTTGGGTCCTAATGTTACCATCAAGTCACTCACCAAAGCCTCCACCTTCTGA 1443 0.5218 MASSQTSSNNLPLKPIPGSYGLPFFGPLSDRHDYFYNQGRDEYFATRIQKYNSTVIRTNMPPGPFISSNPKVIALLDAISFPILFDNSKVEKRDVLDGTFMPSTSYTGGYRTCAFQDTTEPSHNLLKSFYLKLLASKHHTFFPLFRNNLSDHFTDLEDQLAGKSGKASFNTSIGTATFNFLFRLLTEKDPSETKIGSKGPSLVETWLAAQLAPLATLGLPKIFNYVEDLLIRTIPFPAWTVKSSYKKLHEGFSEAGTAVLDEAERAGIKRDEACHNLVFMLGFNAYGGLTNQFPILIKWLGLAGEVLHKQLAGEIRTVVKEEGGVTVGALDKMTLTKSVVYEALRIEPAVPYQYAKAREDLVVESHDAAFEIKKGEMLFGYQPFATKDPKVFENPEEFVGHRFVGDGEKLLKYVYWSNGRETEHPTADNKQCPARDLVVLMCRLYLVEFFLRYDTFTFEFKPVVLGPNVTIKSLTKASTF. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03619 480 Pfam Cytochrome P450 309 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03619 480 PANTHER CYTOCHROME P450 26 11 453 - -
Seca4g03619 480 CDD CYP74 46 472 - -
Seca4g03619 480 SUPERFAMILY Cytochrome P450 11 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03619 480 Gene3D Cytochrome P450 7 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03619 480 FunFam Allene oxide synthase, chloroplastic 11 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03619 Seca-Chr4 62626870 62628927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03619 2 478 Cytochrome P450 AT5G42650 51.357 3.32e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03619 K01723 - gmx:100810890 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03619 4 62626870 62628927 Seca4g03619 4 62626870 62628927 ECH