Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03546 ATGGAGTCACGAGAATACAAAAGATCTGCTCAACCATACAAAAACTCGGTGCCTCAAGATGAAACAATGAACCTACCTTTTCCACCACCTCGCTTTTCTCCTAAGCAGGCACAAAGATATGCTCTTTCATTGTTGTCCTCTCAACATCAGGATTTCCCTTCAACTAAGAAGCAGCAGTCTAATATGGTGCTAGGAAATGGGAAAGATGCAAAGAAAGGTGTTCATGAGAACAGAGGTATTGCATCGCATCATTTTGAAGCTAGCGTCAATGCATCGGGCACTAATCCACAACTTGAAAATCTGGAAGCTGATGGAACAAAAAAAGGAAGAAAAAGGCATACAAACAAGGAATCAGCTAAGGAATCAATAAGGAAGTGGAAACAGGAACGTGAAGGGCTGCAAAGGACCCTTGACCATCTTAAAGTAAAAAATTTTGCACTGAAGAAAAAGTTCCATCGCCTTTCTGAGGATAGCCTAGAGCTCATAGACGAAAACAATTCCATACTGGAAGAACTCATTGAGAAGTATGGGCAAGAACAAGTAGCTGATTTATTGAACATGAAGCCTACTTGA 573 0.4084 MESREYKRSAQPYKNSVPQDETMNLPFPPPRFSPKQAQRYALSLLSSQHQDFPSTKKQQSNMVLGNGKDAKKGVHENRGIASHHFEASVNASGTNPQLENLEADGTKKGRKRHTNKESAKESIRKWKQEREGLQRTLDHLKVKNFALKKKFHRLSEDSLELIDENNSILEELIEKYGQEQVADLLNMKPT. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03546 190 MobiDBLite consensus disorder prediction 103 124 - -
Seca4g03546 190 MobiDBLite consensus disorder prediction 39 65 - -
Seca4g03546 190 Coils Coil 116 143 - -
Seca4g03546 190 Coils Coil 159 179 - -
Seca4g03546 190 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Seca4g03546 190 MobiDBLite consensus disorder prediction 1 73 - -
Seca4g03546 190 MobiDBLite consensus disorder prediction 88 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03546 Seca-Chr4 61786900 61788906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03546 107 184 bZIP Transcription Factor Family AT4G36730 37.179 4.22e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03546 - K09060 ccaj:109801299 110.538