Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03487 ATGGCCTACCACCTCTGCCACCCCTACCCCTGTTTTATATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAGTCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTGATTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTGGTATCTTCTGTAGATAAAGTCATATTTGTTGGATCGCCTGGTGTTGGTAAAATGATAATGAGAAATGCTGCTGAGACCCTAATACCAGTTACACTAGAGCTTGGGGGAAAAGATGCATTTATTGTTTGCAAAGACGTAGATGTGGACGATGGCCCACCACTTGTTGGCAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAAGGCCTTTTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAGTTTTGGACATATAG 450 0.4444 MAYHLCHPYPCFISEHASWSGCFYFRIIQSALAAIGAPEDLIEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMRNAAETLIPVTLELGGKDAFIVCKDVDVDDGPPLVGKYDMGALCMHEHSEKLEGLLNDALDKGAEIVARGVLDI. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03487 149 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 87 94 IPR029510 GO:0016491
Seca4g03487 149 SUPERFAMILY ALDH-like 14 147 IPR016161 GO:0016491
Seca4g03487 149 Pfam Aldehyde dehydrogenase family 14 104 IPR015590 GO:0016491
Seca4g03487 149 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 126 IPR016162 GO:0016491
Seca4g03487 149 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 14 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03487 Seca-Chr4 60642396 60645067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03487 13 145 Aldehyde Dehydrogenase Gene Family AT3G66658 59.777 8.11e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03487 - - lja:Lj4g3v2267580.1 229.18