Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03476 ATGGTGCTGTTTGATCAAGGCACCTATGACAAGCTCCTGTCTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTATGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAATTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCACTCAAGCCAGCAGATTTACACCAGGGCTACTAACACCTAG 210 0.4619 MVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARKAIRELMARGSIRMVSAHSSQQIYTRATNT. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03476 69 PANTHER 40S RIBOSOMAL PROTEIN S25 1 69 IPR004977 -
Seca4g03476 69 Gene3D - 1 69 IPR036388 -
Seca4g03476 69 Pfam S25 ribosomal protein 1 66 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03476 Seca-Chr4 60490530 60492875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03476 1 69 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 92.754 5.59e-44 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03476 K02975 - gmx:100789867 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03476 4 60490530 60492875 Seca4g03476 4 60490530 60492875 ECH