Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03448 ATGGGCCAAAGAAAGGTTCCCAGCGAGCTTGGTATCCAAGCTGATCATGTTAAATCTGATAAGCTCTTGGCAAACCTGAAGCTAGCTTCTTCTCAGCACCAAGATGGTAAAAACAGAGGTGCTGATAGGATGAAGAAAATGAAGAAATCAAGGTCAATTAAGCTTTCTGATTTGGAGGCTCTTCAATCACCGCCTCCAAGGAGGAGCTTATCCCAACCAAGAAAGCCAACATCTCTTCATGTTCCATCCACTACAGAATCCCCACAAAAGCAGAAGCAGAAACCTTTGGTGAGAAGGTCACCCAATTATATGAAACCCACCACCAGTTCAGATGCAAAAAAGGAGCTTTTGCTGGCGAGTCTTCGGAATACCCAATCCAGTTTAGATGGTAAGAATTTACTACAAACAAGTTCGAGTAATTCAAAAGCTACTTCTGTTTCTAGCAAAAACCCTGCAAAATCTTTGCCAAGATCATCTAGTATGAATTTGGTGAGAACATTAACAAAGATCCCTAGTTTTAAGCCTTGTAGACCTTGCCCGAGAAAATCTACCACAGCAGTTCTGTGTGCAGAAATTAGTGCACCAGAGAGAGCTACCTGCTCTTCAACTTTGAAACACTGCAAGTTCCCTGTGTACCTCATGCTTAATCCTGGTAGTACTGAGTCTGAGGGAGCTTCAATCATGAAGGTTTGCCCATACACATATTGTTCTCTTAATGGCCATCGCCATGATGCTTTGCCTCAATTGAAGAGCTTCATGTCAGCAAGTAGGCATCTTCTGAAGACTCAAAAGAATATAAAGCTGGAAGGTCTTAGCCCTCCAAGATTCCAGGTGCCCTGTGAGACAAATGACTCTGATAATGAGCAGATTACCTTTGATGGAAAACCTGCATGTGATGAAGCTGATATGGGTAATCCAATAATCACCCCCTTGGCACAAGAAATTGGTATGGATTTGTTTATTGAAATCTATGCCAGGGAAAAGGAAGGAGCTGACGAAATGGGAAGATTCAACTCCGTCAAACACCTTGAGGATCAAAAAGGTACTGAGTTTGCAATTGAGGAGAATGGCAATGCAGCAGAAGAGAATGTTGTCAAGCAAGTTACTCCTCCAGGCATGCCTCATGATCTCCCAAAGTCTGAGATTGCTCTCGAAGAGGATTTCAAAAACAACTTTGATGCTGCTGCAATTGAAGCAGATACAGAGGGGAGCTTTCATCAAGAACTAAGTGCTGGAGATGCAGATGAAAACCACCCACCTAGCTGGTTTGATGAAGAAATATGTACGGGAAGCTACTGCAGTGAGGTTCACTATGATGGGGAACACATGGAAAATATTGAATTGGATGACTTTGATTCCCAAGATACTGATATGGAGTGGGAGGAGGAACAACTTTGTGCAGTCAACCATGAAGACAATATCAATTCTTCTGACATGCAGGAGGAGACTGACTCAAAATTTGAGTCCTTATCAGAGAGTTCGTATGGTATATCTGAAATGTGGTTAGATGACATTCTTAGCAACCATTATGCAGACATTCTGTTAGAAGAAGCACTCCAAGCAACCAAAGAAGAGAAAAGCACCTGTTTTGAGGCACAACCTCATACTGATTCTGTCCTGGAAGGCACAAATGATAGCATCAAGTTCAAGACTCAAGAAACTGATTATCCATCCAACTGCACAAGTTATGAGTATGACCAATCTTCTTTGACAGAGGAAGTACTTCACCATCTGACAAACTCAGAAGATGATAATAGAGAAAGTGAAAAACATGTGGATGATGGGACCAATTGTGCCTCAGTGGTACTTGATGATGATACAACAGAAAATAGTAAAGGCTACAATATCACTGAAGCTTGCAAGATTGATGAGAGCTGTGAAGACAACATCACTAGCCTAAAGATAAATGATAAAGGAATTAATCAGAAGAACCAAATTCACTCGCCTGATGAGCCCGAAGAAAGCACCATTATTGTTCAGGATCAGAAATTATTGGAGGAAGATCAAGTTAGAGCTAGTAAGTTCCACACCACATGCTGCATAGGTGGTGAAGAGCAGAGCACAGGCAAGAATTGTCAATGGGCAGCTAGGCACAAGAGACCTGTGCAAGATTTTGAGGAAATGGGAAAAATCAACCCACGGAAGCCAAATTTCCTGCCCTTGGTTCCTGACCCAGAACCAGAAAAGGTTGACCTGAAGCATCAAATGATGGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTTGCACTCAGACAAGCTGTCACAAAACTTGCTCCAGCTGGGAAAAGGAGGGTTGCGTTGCTTGTTGAAGCTTTTGAAACAGTAATGTCAATACCCAAATGTGAAACCCATATGAGAAATGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCTTGTAGCTAA 2412 0.4204 MGQRKVPSELGIQADHVKSDKLLANLKLASSQHQDGKNRGADRMKKMKKSRSIKLSDLEALQSPPPRRSLSQPRKPTSLHVPSTTESPQKQKQKPLVRRSPNYMKPTTSSDAKKELLLASLRNTQSSLDGKNLLQTSSSNSKATSVSSKNPAKSLPRSSSMNLVRTLTKIPSFKPCRPCPRKSTTAVLCAEISAPERATCSSTLKHCKFPVYLMLNPGSTESEGASIMKVCPYTYCSLNGHRHDALPQLKSFMSASRHLLKTQKNIKLEGLSPPRFQVPCETNDSDNEQITFDGKPACDEADMGNPIITPLAQEIGMDLFIEIYAREKEGADEMGRFNSVKHLEDQKGTEFAIEENGNAAEENVVKQVTPPGMPHDLPKSEIALEEDFKNNFDAAAIEADTEGSFHQELSAGDADENHPPSWFDEEICTGSYCSEVHYDGEHMENIELDDFDSQDTDMEWEEEQLCAVNHEDNINSSDMQEETDSKFESLSESSYGISEMWLDDILSNHYADILLEEALQATKEEKSTCFEAQPHTDSVLEGTNDSIKFKTQETDYPSNCTSYEYDQSSLTEEVLHHLTNSEDDNRESEKHVDDGTNCASVVLDDDTTENSKGYNITEACKIDESCEDNITSLKINDKGINQKNQIHSPDEPEESTIIVQDQKLLEEDQVRASKFHTTCCIGGEEQSTGKNCQWAARHKRPVQDFEEMGKINPRKPNFLPLVPDPEPEKVDLKHQMMDERKNAEEWMLDFALRQAVTKLAPAGKRRVALLVEAFETVMSIPKCETHMRNDSPFAHARPIQACS. 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03448 803 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 779 IPR044681 GO:0005516
Seca4g03448 803 Pfam Plant calmodulin-binding domain 704 779 IPR012417 GO:0005516
Seca4g03448 803 MobiDBLite consensus disorder prediction 128 159 - -
Seca4g03448 803 SMART CaM_binding_2 666 779 IPR012417 GO:0005516
Seca4g03448 803 MobiDBLite consensus disorder prediction 28 114 - -
Seca4g03448 803 MobiDBLite consensus disorder prediction 65 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03448 Seca-Chr4 60024633 60027044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03448 685 803 Calmodulin-binding Proteins AT2G38800 48.760 2.49e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03448 - - gmx:102670203 1031.55