Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03420 ATGGGAGTGTGTAACTGCTCTTTTCTTTTTTCCTCCCATTTTTCTGTTTGGGTTTATTTTGTTCCTTCCCTTGTTTCTATGCTTGGGCTTTTAGATTTATACAGACTATGCACTTTTTGCTGGCAGCCTACCCAAGAAATATCTTGGAAGAATGAAGCTTACTTGTTATTTCCAGTTCATTTGGATGGAACGTTGCTAGATAATGCTAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTGCCTCAGATGTTCTTCAAATATTTCAGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTGGTAATGTTCTTATAACACATAGAAAAGGACAACCGCCTCTTGCCATACTGATGGATTTTGGTAGTGCTCGACCTGCCAGGAGGCAAATTCGCTCCCGATCCGAGGCACTGCAGTTGCAGGAGTGGGCATCTGAACATTGCTCTGCTCCTTTCCGTGCTCCTGAGCTGTGGGATTGCCCAAGCTATGCTGATATAGATGAAAGGTCTGATATTTGGTCACTAGGATGCACCTTGTATGCAATAATGTATGGAGTATCTCCGTTTGAATATGCACTTGGAGAATCTGGTGGAAGCTTGCAACTGGCCATTATAAATGCTCAGGTCAAATGGCCAGCTGGACCTAAGCCTCCATACCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCCCAGGCTACTGTGCGGCCCCGAATAGACGATATCATAATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCCTTGA 807 0.4349 MGVCNCSFLFSSHFSVWVYFVPSLVSMLGLLDLYRLCTFCWQPTQEISWKNEAYLLFPVHLDGTLLDNAKTMKAKKEFYSASDVLQIFQQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARRQIRSRSEALQLQEWASEHCSAPFRAPELWDCPSYADIDERSDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKFSP. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03420 268 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03420 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Seca4g03420 268 SUPERFAMILY Protein kinase-like (PK-like) 47 258 IPR011009 -
Seca4g03420 268 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 40 266 - -
Seca4g03420 268 Pfam Protein kinase domain 50 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g03420 268 Gene3D Transferase(Phosphotransferase) domain 1 24 267 - -
Seca4g03420 268 SMART serkin_6 18 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03420 Seca-Chr4 59730391 59737950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03420 23 264 Receptor kinase-like Gene Family AT2G23770 23.293 5.63e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Seca4g03420 Pkinase 6.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03420 K08856 - gmx:100803659 443.351