Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03419 ATGAACAACCACCCTGCAGGAGATGAAAGGGATCATCATCAGTACAGTCAGAAGAAGAGGAAATCAACAAGCTCTGAATCCATGAGGAGTAACAATTCAAGGAGAAGATTCTGCAGCAACAAAAATCATGATCAGGAAGTTAAAGGATCAGGAGTCTCCACCACACTGAAGCTTTATGATGACCCTTGGAAGATCAAGAAGACTCTAACTGACAGTGATCTTGGAATCTTGAGCAGACTCTTGTTGGCTGCAGATGTGGTGAAGAAACAGGTTTTGCCTATGTTGGGTGTTGATCATGCAAGAGCTGCTGAGACTGAGGAAGGTTCCCCAGTTAGAGTTTGGGACATGGACACCAAAACCATGCACCAACTCGTTCTCAAGCGATGGTCTTCATCTAAAAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTTGTCAGAAGAAGAGAGCTTAAGAAAGGGGATGAGATTGGATTCCACTGGGATCCTTATAACTGTGCTTTCAACTTCTGA 513 0.4327 MNNHPAGDERDHHQYSQKKRKSTSSESMRSNNSRRRFCSNKNHDQEVKGSGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADVVKKQVLPMLGVDHARAAETEEGSPVRVWDMDTKTMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNF. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03419 170 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 22 170 - -
Seca4g03419 170 CDD B3_DNA 63 170 IPR003340 GO:0003677
Seca4g03419 170 Gene3D - 62 169 IPR015300 -
Seca4g03419 170 MobiDBLite consensus disorder prediction 1 25 - -
Seca4g03419 170 SUPERFAMILY DNA-binding pseudobarrel domain 61 165 IPR015300 -
Seca4g03419 170 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03419 Seca-Chr4 59683380 59683892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03419 65 160 RAV Transcription Factor Family AT1G50680 33.981 1.27e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03419 - - gmx:102670334 255.373