Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03386 ATGGAATTTGATAATGGTAAACAGAAGCAAAGCTGCACATTTAGAGAGCTCAAGTTGGTTGCCTTAGTTGCTCTATGCCTCATTTTAATTTCTCCTGCTGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATATGGCCACTGTGACATTGTTTAACTTTCAACTGTACCGGAATATTATGAACCCTGGATGGACTCTAGGATGGACATGGGCAAAGAAAGAAATTATATGGGCTGTGATGGGAGCTCAAGCAACAGAACAAGGAGATTGTTCCAAGTTCAAGTTAAAGATTCCTCATAGCTGCAAGAGGAGCCCTCAAGTGGTTGACTTGCTACCAGGAGCTCCTTTCAATATGCAATATAACAACTGTTGCAAAGGGGGTGTGCTAACATCTTGGGGGCAGGACCCTAATGGTGCAGTTTCAGCATTTCAGCTGGGAGTGGGGCTCTCTGGCACCTCTAACAAGACAGTGAAACTGCCCAAAAACTTCAAATTGCTAGGTCCAGGACCAGGGTATTCATGTGGCCCTGCAAAACTTGTTCCAGCCACTGTCATCCTCACAGATGATCATAGGCGAAAAGCTCAAGCATTGAGTATGCATACTAATTCCCTTCATTCCTTAACTTTGTATGATACAAACTCTAGTCCTATATATAAGATACATAAGACTAAAATCATTAAGACTAAGGAAATGCATCAGAATCTGTTAATGTAA 759 0.419 MEFDNGKQKQSCTFRELKLVALVALCLILISPADAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAVMGAQATEQGDCSKFKLKIPHSCKRSPQVVDLLPGAPFNMQYNNCCKGGVLTSWGQDPNGAVSAFQLGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVILTDDHRRKAQALSMHTNSLHSLTLYDTNSSPIYKIHKTKIIKTKEMHQNLLM. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03386 252 Pfam COBRA-like protein 59 214 IPR006918 GO:0010215|GO:0016020
Seca4g03386 252 PANTHER PROTEIN COBRA 23 215 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03386 Seca-Chr4 58953942 58956402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03386 33 212 COBRA Gene Family AT5G15630 73.333 5.16e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03386 - - gmx:100813134 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03386 4 58953942 58956402 Seca4g03386 4 58953942 58956402 ECH