Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03336 ATGCTAGGACGACGAGTGTTCAATGATGGCAATGGTGGCTGTGATCCTAAAGCTGATGAGTTTAAGTCTATGGTTGTGGAGTTGATGGTGTTGGCTGGTGTTTTCAATATTGGTGACTTTATTCCTTCCTTAGAGTGGCTGGACCTTCAAGGAGTGCAAGCTAAGATGAAGAAATTGCACAAACGATTTGATGCATTTTTAACCAGCATTATTGAGGAACACAAGAGTGCTTCTAAGAGTGAGAAGCATAAGGATATGTTGAGTATGTTGTTGTCTCTTAAGGAGGTTTCGGATGATGATGGAAACAAACTCAGTGATGTCGAGATCAAAGCATTACTTCTGAACATGTTTGTAGCAGGGACAGACACATCATCAAGCACAATAGAATGGGCAATTGCAGAACTTATCCGGAACCCAAGAATTTTGGCCCAAGTCCAACAAGAATTGGACACTGTTGTGGGCAGAGACAGGAATGTGAAAGAAGAGGATTTAGCTCACCTACCATACTTACAAGCAGTGGTAAAGGAAACATTTCGTTTACACCCATCAACCCCTCTTTCCCTCCCACGAATCGCATCTGAGAGCTGTGAGATATTTGGGTACCACATTCCAAAGGGTGCCACTCTCTTGGTGAATGTATGGGCCATAGCACGTGACCCAAAAGAATGGGCTGAGCCATTGGAGTTCAGGCCCGAAAGGTTCCTGCAAGGTGAGAAAGCTGATGTTGATGTTAGGGGCAATGACTTTGAGGTGATTCCATTTGGTGCTGGACGTAGAATATGTGCTGGTATGAACCTTGGGCTTCGTATGGTTCAGCTGCTAACTGCAACCCTGGCCCATTCATTTAGCTGGGAACTTGAAAATGGGTTGAACCCAGAAAAACTGAATATGGACGAAGCTTATGGGCTAGGCTTGCAACGGGCCGTGCCTCTATCAGTACACCCTAAGCCCAGGCTATCACCACATGTGTACTCATGGGCTTCCTAA 987 0.4529 MLGRRVFNDGNGGCDPKADEFKSMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDAFLTSIIEEHKSASKSEKHKDMLSMLLSLKEVSDDDGNKLSDVEIKALLLNMFVAGTDTSSSTIEWAIAELIRNPRILAQVQQELDTVVGRDRNVKEEDLAHLPYLQAVVKETFRLHPSTPLSLPRIASESCEIFGYHIPKGATLLVNVWAIARDPKEWAEPLEFRPERFLQGEKADVDVRGNDFEVIPFGAGRRICAGMNLGLRMVQLLTATLAHSFSWELENGLNPEKLNMDEAYGLGLQRAVPLSVHPKPRLSPHVYSWAS. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03336 328 FunFam Putative cytochrome P450 superfamily protein 110 316 - -
Seca4g03336 328 PRINTS P450 superfamily signature 119 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS P450 superfamily signature 172 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS P450 superfamily signature 252 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 Pfam Cytochrome P450 6 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 SUPERFAMILY Cytochrome P450 3 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 Gene3D Cytochrome P450 1 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PANTHER CYTOCHROME P450 98A9 2 325 - -
Seca4g03336 328 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS E-class P450 group I signature 251 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS E-class P450 group I signature 212 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS E-class P450 group I signature 128 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS E-class P450 group I signature 108 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 PRINTS E-class P450 group I signature 261 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03336 328 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 254 263 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03336 Seca-Chr4 57553116 57557052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03336 1 328 Cytochrome P450 AT5G07990 69.394 1.35e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03336 K05280 - gmx:547475 565.459