Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03330 ATGTCTCCATTGATTATTGGCTTAGCTACAATAGCAGCAGCCATACTCATATACCGTATTGTCAAGTTTGCAACACGCCCTTCACTACCACTCCCTCCGGGCCCTAAACCATGGCCCGTAGTAGGAAACTTGCCACACGTGGGCCCTGTGCCACACCACTCTCTAGCAGCCTTGGCCCGCACCTATGGCCCATTGATGCACCTTAAAATGGGCTTTGTGGATGTAGTGGTGGCGGCTTCAGCCTCCGTGGCGGAACAGTTCTTGAAGGTTCATGATGCCAATTTCAGTAGCCGGCCACCTAACGCCGGAGCAAAATACATGGCTTATAACTATCAGGATCTTGTATTTGCTCCGTACGGTGCACGGTGGCGCTATCTCCGGAAAATCACCTCCGTTCACCTCTTCTCCGGCAAAGCCTTGGATGAATTCAAACACTTGCGTCAGGAAGAGGTAGCAAGATTGACACGCAACTTAGCAAGTTCAGACTCAAAAACTGTGAATTTGGGACAATTATTGAATGTGTGCACCACTAACGCATTGGCCAGGGTAATGCTAGGACGACGAGTGTTCAATGATGGCAATGGTGGTTGTGATCCTAAAGCTGATGAGTTTAAGTCTATGGTTGTGGAGTTGATGGTGTTAGCAGGTGTTTTCAATATTGGTGACTTTATTCCTTCCTTAGAGTGGCTAGACCTTCAAGGAGTGCAAGCTAAGATGAAGAAATTGCACAAAAGGTTTGATGCATTTTTAACCAGCATTATTGAGGAACACAAGAGTGCTTCTAAGAGTGAGAAACATAAGGATATGTTGAGTATGTTGTTGTCTCTTAAAGAGGTTTCAGATGATGATGGAAACAAACTCAGTGATGTCGAGATCAAAGCATTACTTCTGAACATGTTTGCAGCAGGGACAGACACATCATCAAGCACCACAGAATGGGCTATTGCAGAACTGATCCGAAACCCAAGAATTTTGGCCCAAGTCCAACAAGAATTGGACACTGTTGTAGGCAGAGACAGGAATGTGAAAGAAGAGGATTTGCCTCACCTACCATACTTACAAGCAGTGGTAAAGGAAACTTTCCGTTTACACCCATCAACCCCTCTTTCCCTCCCACGAGTTGCAGCTGAGAGCTGTGAGATATTTGGGTACCACATTCCAAAGGGTGCAACTGTCTTGGTGAATGTATGGGCCATAGCACGTGACCCAAAAGAATGGGCTGAACCATTGGAGTTCAAGCCCGAAAGGTTCCTGCAAGGTGAGAAGGCTGATGTTGATGTTAGGGGCAATGACTTTGAGGTGATTCCATTTGGTGCTGGACGTAGAATATGTGCTGGTATGAACCTTGGGCTTCGTATGGTTCAGCTGCTAACTGCAACCCTGGCCCATTCATTTAACTGGGAACTAGAAAATGGGCTGAACCCAGAAAAACTGAATATGGATGAAGCTTATGGGCTAACATTACAACGGGCCGTGCCTCTATCAGTGCACCCTAAGCCCAGGCTATCACCACATGTGTACTCATCGGCTTCCTAA 1536 0.4661 MSPLIIGLATIAAAILIYRIVKFATRPSLPLPPGPKPWPVVGNLPHVGPVPHHSLAALARTYGPLMHLKMGFVDVVVAASASVAEQFLKVHDANFSSRPPNAGAKYMAYNYQDLVFAPYGARWRYLRKITSVHLFSGKALDEFKHLRQEEVARLTRNLASSDSKTVNLGQLLNVCTTNALARVMLGRRVFNDGNGGCDPKADEFKSMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDAFLTSIIEEHKSASKSEKHKDMLSMLLSLKEVSDDDGNKLSDVEIKALLLNMFAAGTDTSSSTTEWAIAELIRNPRILAQVQQELDTVVGRDRNVKEEDLPHLPYLQAVVKETFRLHPSTPLSLPRVAAESCEIFGYHIPKGATVLVNVWAIARDPKEWAEPLEFKPERFLQGEKADVDVRGNDFEVIPFGAGRRICAGMNLGLRMVQLLTATLAHSFNWELENGLNPEKLNMDEAYGLTLQRAVPLSVHPKPRLSPHVYSSAS. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03330 511 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 FunFam Red aleurone1 23 499 - -
Seca4g03330 511 PANTHER CYTOCHROME P450 98A9 3 508 - -
Seca4g03330 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca4g03330 511 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03330 511 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03330 Seca-Chr4 57450997 57457375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03330 1 511 Cytochrome P450 AT5G07990 66.731 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03330 K05280 - gmx:547475 867.07