Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03277 ATGGATACAAACTTGATTCTCAAAGTTAGTTTTGAATTCGATAATTTAGAAGACACATGGCAATTTTGGGTGAACTACGAAGGTATAAAAGGCTTTGGAGTTAGAAAACAATATTCAAGTAAGAGTAAGAAAGATGGTTTCGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAAACCAGACTCAATGGATTATAAAACGACCAATCCAAAACCCAAGACAAGAACGAGGTGTATGGCAAGAATGAAAGTCAAACGATTCAATGAAAAATACAGAGTTATTAATTTTATCGATGATCATAATCACCCACTCCAACCACTAGAAACAGTGCATATGTTAGTTTCTCAATGA 360 0.3417 MDTNLILKVSFEFDNLEDTWQFWVNYEGIKGFGVRKQYSSKSKKDGFVTSYLYVCCKEGVRKPDSMDYKTTNPKPKTRTRCMARMKVKRFNEKYRVINFIDDHNHPLQPLETVHMLVSQ. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03277 119 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 108 - -
Seca4g03277 119 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03277 Seca-Chr4 56470583 56470942 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g03277 FAR1 1.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03277 - - vun:114184605 182.57